Cow genome map

Conread name: rtra03_h21r1.y1

Conread position: 4-452
Cow position: chr16:5663756-5664203 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 4-574
Cow position: chr16:48012689-48012141 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 5

Conread position: 5-573
Cow position: chr16:8872463-8871889 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 6-491
Cow position: chr16:19171050-19170554 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 141

Conread position: 6-538
Cow position: chr16:11744508-11745045 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 6-562
Cow position: chr16:6945228-6945788 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 35

Conread position: 6-596
Cow position: chr16:25455495-25454897 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 8-596
Cow position: chr16:4462341-4461748 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 9-563
Cow position: chr16:34207854-34208380 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 367
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 118

Conread position: 11-611
Cow position: chr16:20203973-20204584 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 11-624
Cow position: chr16:43122-43750 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 11-625
Cow position: chr16:47772236-47772856 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 6

Conread position: 13-302
Cow position: chr16:23250015-23249735 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-312
Cow position: chr16:3144424-3144134 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-312
Cow position: chr16:5762766-5763071 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 156

Conread position: 13-312
Cow position: chr16:16538758-16539041 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 23, 111

Conread position: 13-312
Cow position: chr16:22799695-22799395 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 156

Conread position: 13-350
Cow position: chr16:54323345-54323017 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-368
Cow position: chr16:20968824-20968475 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 13-368
Cow position: chr16:36241109-36241459 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-372
Cow position: chr16:1434171-1434525 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 13-383
Cow position: chr16:1565702-1565337 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 13-390
Cow position: chr16:41161495-41161112 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-396
Cow position: chr16:6266971-6266607 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 66

Conread position: 13-410
Cow position: chr16:16238850-16238453 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 13-435
Cow position: chr16:7083621-7084048 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 201

Conread position: 13-482
Cow position: chr16:46521074-46520592 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 202

Conread position: 13-498
Cow position: chr16:5487745-5488233 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 157

Conread position: 13-500
Cow position: chr16:29049406-29049895 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-510
Cow position: chr16:24621723-24621222 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-540
Cow position: chr16:34505672-34506206 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 201

Conread position: 13-542
Cow position: chr16:17111226-17111759 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-547
Cow position: chr16:23562425-23562951 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 13-551
Cow position: chr16:15411078-15410546 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 13-583
Cow position: chr16:14663132-14662559 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 13-584
Cow position: chr16:49231300-49230736 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 142

Conread position: 13-585
Cow position: chr16:7466588-7467163 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-585
Cow position: chr16:25343950-25344530 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 201

Conread position: 13-587
Cow position: chr16:41033277-41033852 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 141

Conread position: 13-587
Cow position: chr16:45817134-45816563 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 25

Conread position: 13-595
Cow position: chr16:3149056-3148473 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-595
Cow position: chr16:4426068-4426654 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 42

Conread position: 13-595
Cow position: chr16:26665691-26666267 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 13-595
Cow position: chr16:39474803-39475392 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 249

Conread position: 13-596
Cow position: chr16:416870-417459 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 13-596
Cow position: chr16:839258-839841 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:2408920-2408330 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:3010810-3011402 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:3770036-3769447 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 13-596
Cow position: chr16:7674485-7673897 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 141

Conread position: 13-596
Cow position: chr16:8814126-8813539 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:10440215-10440803 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 13-596
Cow position: chr16:11633869-11633280 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:12161305-12160719 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:12535962-12535384 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 13-596
Cow position: chr16:14352706-14352120 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:15187041-15187628 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 13-596
Cow position: chr16:15494434-15495018 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 129

Conread position: 13-596
Cow position: chr16:15980411-15979814 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 207

Conread position: 13-596
Cow position: chr16:21017534-21018123 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:25443851-25444440 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 200

Conread position: 13-596
Cow position: chr16:26990973-26990376 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:27731407-27730817 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:28168343-28167754 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 154

Conread position: 13-596
Cow position: chr16:37478886-37478297 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 13-596
Cow position: chr16:40294196-40293606 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-596
Cow position: chr16:43895288-43894698 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr16:52526206-52526795 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-597
Cow position: chr16:25260099-25260688 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 199

Conread position: 13-601
Cow position: chr16:15812043-15812637 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position: chr16:18974840-18975437 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 184

Conread position: 13-601
Cow position: chr16:23876555-23875971 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position: chr16:24210417-24209829 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 109

Conread position: 13-601
Cow position: chr16:28194325-28193731 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 72

Conread position: 13-601
Cow position: chr16:46554398-46554991 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 128

Conread position: 13-601
Cow position: chr16:47403358-47403949 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position: chr16:4756001-4756596 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 78

Conread position: 13-604
Cow position: chr16:16150774-16150176 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-604
Cow position: chr16:20377436-20378023 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position: chr16:31586722-31586128 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 13-605
Cow position: chr16:41515109-41515705 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 13-610
Cow position: chr16:55592001-55591402 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-612
Cow position: chr16:51086757-51087365 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-613
Cow position: chr16:193959-193356 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 154

Conread position: 13-613
Cow position: chr16:3819339-3819949 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 207

Conread position: 13-613
Cow position: chr16:25173247-25173822 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 164

Conread position: 13-613
Cow position: chr16:49254259-49253664 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-615
Cow position: chr16:2394344-2394945 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-615
Cow position: chr16:44127864-44127273 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 13-617
Cow position: chr16:16267920-16267316 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 13-625
Cow position: chr16:37443545-37442945 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 14-351
Cow position: chr16:3348908-3349259 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 177

Conread position: 14-351
Cow position: chr16:51401875-51401534 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 157

Conread position: 14-371
Cow position: chr16:47475991-47476335 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 78, 130

Conread position: 14-402
Cow position: chr16:23790067-23790457 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 27, 16

Conread position: 14-478
Cow position: chr16:41029833-41029370 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 324
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 207

Conread position: 14-481
Cow position: chr16:25453532-25453081 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 14-595
Cow position: chr16:10966258-10965684 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 173

Conread position: 14-597
Cow position: chr16:42117738-42118308 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 14-612
Cow position: chr16:53611777-53612383 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 204

Conread position: 14-613
Cow position: chr16:19887003-19887600 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 24

Conread position: 14-613
Cow position: chr16:49529388-49529983 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 16

Conread position: 14-613
Cow position: chr16:51040529-51041128 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 203

Conread position: 14-615
Cow position: chr16:3331885-3332486 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 200

Conread position: 14-625
Cow position: chr16:31425044-31425640 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 19-570
Cow position: chr16:43844970-43844431 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 141

Conread position: 19-596
Cow position: chr16:2725242-2724660 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 19-613
Cow position: chr16:25262604-25263182 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 20-587
Cow position: chr16:48104071-48104638 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 133

Conread position: 22-367
Cow position: chr16:29207238-29206908 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 129

Conread position: 23-399
Cow position: chr16:5591287-5591658 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 95

Conread position: 24-480
Cow position: chr16:25742739-25743185 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 190

Conread position: 26-320
Cow position: chr16:5655149-5655431 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 135

Conread position: 26-587
Cow position: chr16:25955590-25955031 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 26-604
Cow position: chr16:34532284-34532866 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 26-605
Cow position: chr16:29035881-29036447 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 183

Conread position: 26-613
Cow position: chr16:26653658-26654244 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 186

Conread position: 27-605
Cow position: chr16:42074900-42074326 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 120

Conread position: 28-375
Cow position: chr16:42734642-42734300 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 9

Conread position: 30-397
Cow position: chr16:23098333-23098694 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 138

Conread position: 31-397
Cow position: chr16:23097170-23096811 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 32-625
Cow position: chr16:18694970-18694380 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 10

Conread position: 33-469
Cow position: chr16:54175396-54175830 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 91

Conread position: 36-454
Cow position: chr16:28268847-28268436 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 32

Conread position: 41-612
Cow position: chr16:53990967-53991537 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 42-468
Cow position: chr16:44661747-44662156 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 48-587
Cow position: chr16:12650940-12651481 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 50-600
Cow position: chr16:39615251-39615791 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 53-579
Cow position: chr16:11054014-11054536 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 54-601
Cow position: chr16:37145993-37146546 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 56-586
Cow position: chr16:19721991-19722508 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 52

Conread position: 64-576
Cow position: chr16:34527-35042 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 146

Conread position: 71-596
Cow position: chr16:657995-658524 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 84

Conread position: 72-587
Cow position: chr16:26389135-26388612 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 72-596
Cow position: chr16:46102582-46102053 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 96

Conread position: 76-473
Cow position: chr16:25039940-25040323 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 265
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 113

Conread position: 90-601
Cow position: chr16:21189311-21189827 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 120

Conread position: 104-331
Cow position: chr16:6733800-6733584 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 73, 63

Conread position: 104-581
Cow position: chr16:44189839-44189341 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 325
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 27

Conread position: 107-370
Cow position: chr16:4962880-4962625 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 104

Conread position: 118-613
Cow position: chr16:14440452-14440952 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 137-625
Cow position: chr16:48496038-48495544 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 73

Conread position: 139-311
Cow position: chr16:37925964-37925806 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 148-518
Cow position: chr16:43744461-43744106 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 206, 50

Conread position: 150-559
Cow position: chr16:7009172-7009573 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 156-605
Cow position: chr16:40656-41107 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 11

Conread position: 157-604
Cow position: chr16:54180234-54179792 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 162-611
Cow position: chr16:25964040-25964488 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 53

Conread position: 165-612
Cow position: chr16:4973394-4972943 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 45

Conread position: 168-611
Cow position: chr16:45550279-45550720 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 52

Conread position: 170-625
Cow position: chr16:44049790-44049328 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 40

Conread position: 171-596
Cow position: chr16:43563258-43562831 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 39

Conread position: 172-595
Cow position: chr16:28206973-28206548 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 38

Conread position: 172-612
Cow position: chr16:30052085-30052528 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 15

Conread position: 184-366
Cow position: chr16:55867157-55867333 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 141, 26

Conread position: 193-573
Cow position: chr16:52524447-52524833 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 57

Conread position: 205-601
Cow position: chr16:42210657-42211065 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 219-571
Cow position: chr16:55578848-55579183 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 116, 29

Conread position: 219-578
Cow position: chr16:28473747-28473390 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 37

Conread position: 219-595
Cow position: chr16:13422743-13422359 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 219-601
Cow position: chr16:4343726-4343336 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 219-604
Cow position: chr16:1733918-1734310 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 219-604
Cow position: chr16:19081228-19081624 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 219-613
Cow position: chr16:43770971-43770571 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 219-624
Cow position: chr16:27010355-27010771 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 89, 29

Conread position: 220-625
Cow position: chr16:37487080-37486664 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 34

Conread position: 227-625
Cow position: chr16:37925789-37925391 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 17

Conread position: 243-548
Cow position: chr16:24146226-24146527 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 90, 11

Conread position: 253-497
Cow position: chr16:25168268-25168529 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 125

Conread position: 253-601
Cow position: chr16:27593617-27593253 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 253-601
Cow position: chr16:54479411-54479775 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 253-604
Cow position: chr16:2233515-2233154 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 108

Conread position: 253-604
Cow position: chr16:14100059-14100424 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 254-518
Cow position: chr16:15549062-15549335 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 63, 20

Conread position: 254-578
Cow position: chr16:10860111-10859783 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 53

Conread position: 254-613
Cow position: chr16:7154808-7155185 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 255-572
Cow position: chr16:24738670-24738995 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 60

Conread position: 260-568
Cow position: chr16:55150567-55150891 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 57

Conread position: 260-612
Cow position: chr16:45608627-45608997 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 315

Conread position: 262-533
Cow position: chr16:34247670-34247386 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 207

Conread position: 267-585
Cow position: chr16:23672772-23673101 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 62, 226

Conread position: 269-596
Cow position: chr16:23533776-23533435 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 274-527
Cow position: chr16:42742310-42742054 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 174

Conread position: 276-590
Cow position: chr16:11309589-11309903 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 28

Conread position: 282-570
Cow position: chr16:45655354-45655056 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 180

Conread position: 283-576
Cow position: chr16:9024960-9025257 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 65

Conread position: 292-613
Cow position: chr16:47367242-47367567 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 104

Conread position: 327-587
Cow position: chr16:19671951-19671681 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 148

Conread position: 329-612
Cow position: chr16:340065-340359 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 175

Conread position: 334-612
Cow position: chr16:37455189-37454902 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 158

Conread position: 349-562
Cow position: chr16:19066765-19066990 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 141

Conread position: 349-625
Cow position: chr16:5416962-5416684 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 177

Conread position: 351-541
Cow position: chr16:16231092-16231292 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 351-571
Cow position: chr16:15256163-15255931 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 354-609
Cow position: chr16:37671185-37670914 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 146

Show alignments to all cow chromosomes.