Cow genome map

Conread name: rtra03_h21r1.y1

Conread position: 4-410
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 100

Conread position: 4-604
Cow position:
Alignm length: 617
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 146

Conread position: 7-455
Cow position:
Alignm length: 463
Alignm identity: 307
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 15

Conread position: 7-619
Cow position:
Alignm length: 626
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 8-595
Cow position:
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 24

Conread position: 9-616
Cow position:
Alignm length: 633
Alignm identity: 410
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 28, 86

Conread position: 11-487
Cow position:
Alignm length: 487
Alignm identity: 319
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 81, 34

Conread position: 11-601
Cow position:
Alignm length: 611
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 203

Conread position: 11-611
Cow position:
Alignm length: 615
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 6

Conread position: 11-613
Cow position:
Alignm length: 629
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 13-410
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 73, 19

Conread position: 13-452
Cow position:
Alignm length: 456
Alignm identity: 304
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 11

Conread position: 13-480
Cow position:
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-497
Cow position:
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 13-498
Cow position:
Alignm length: 500
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 154

Conread position: 13-518
Cow position:
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 19

Conread position: 13-541
Cow position:
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 19

Conread position: 13-544
Cow position:
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 19

Conread position: 13-546
Cow position:
Alignm length: 551
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-587
Cow position:
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 124

Conread position: 13-587
Cow position:
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-595
Cow position:
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 601
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 13-596
Cow position:
Alignm length: 604
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 13-596
Cow position:
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 611
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 165

Conread position: 13-596
Cow position:
Alignm length: 604
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 145

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 13-596
Cow position:
Alignm length: 607
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 607
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 610
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 198

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 13-604
Cow position:
Alignm length: 610
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position:
Alignm length: 613
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position:
Alignm length: 609
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-610
Cow position:
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 114

Conread position: 13-613
Cow position:
Alignm length: 624
Alignm identity: 396
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 80, 27

Conread position: 13-613
Cow position:
Alignm length: 619
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 13-615
Cow position:
Alignm length: 623
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 13-617
Cow position:
Alignm length: 623
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-624
Cow position:
Alignm length: 639
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 14-301
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 20

Conread position: 14-423
Cow position:
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 90

Conread position: 14-443
Cow position:
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 94

Conread position: 14-478
Cow position:
Alignm length: 482
Alignm identity: 322
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 50

Conread position: 14-546
Cow position:
Alignm length: 552
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 14-573
Cow position:
Alignm length: 578
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 200

Conread position: 14-579
Cow position:
Alignm length: 577
Alignm identity: 367
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 126

Conread position: 14-583
Cow position:
Alignm length: 585
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 14-585
Cow position:
Alignm length: 589
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 27

Conread position: 14-592
Cow position:
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 50

Conread position: 14-601
Cow position:
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 155

Conread position: 14-625
Cow position:
Alignm length: 628
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 141

Conread position: 15-586
Cow position:
Alignm length: 589
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 201

Conread position: 16-613
Cow position:
Alignm length: 631
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 47

Conread position: 17-579
Cow position:
Alignm length: 581
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 197

Conread position: 24-596
Cow position:
Alignm length: 593
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 146

Conread position: 25-410
Cow position:
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 26-382
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 186

Conread position: 30-609
Cow position:
Alignm length: 597
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 60

Conread position: 32-625
Cow position:
Alignm length: 608
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 132

Conread position: 33-401
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 9, 34

Conread position: 43-612
Cow position:
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 124

Conread position: 43-613
Cow position:
Alignm length: 578
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 108

Conread position: 48-378
Cow position:
Alignm length: 337
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 37

Conread position: 53-434
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 281, 20

Conread position: 64-587
Cow position:
Alignm length: 538
Alignm identity: 343
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 18

Conread position: 67-596
Cow position:
Alignm length: 544
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 73-423
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 74

Conread position: 75-613
Cow position:
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 161

Conread position: 82-618
Cow position:
Alignm length: 551
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 98

Conread position: 83-579
Cow position:
Alignm length: 517
Alignm identity: 341
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 90

Conread position: 90-601
Cow position:
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 77

Conread position: 91-410
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 239, 76

Conread position: 95-396
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 219, 115

Conread position: 96-368
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 230, 49

Conread position: 112-587
Cow position:
Alignm length: 498
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 113-493
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 97

Conread position: 119-596
Cow position:
Alignm length: 497
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 48

Conread position: 125-613
Cow position:
Alignm length: 508
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 63

Conread position: 128-586
Cow position:
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 145-586
Cow position:
Alignm length: 453
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 20

Conread position: 147-596
Cow position:
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 148-580
Cow position:
Alignm length: 451
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 16

Conread position: 152-613
Cow position:
Alignm length: 482
Alignm identity: 323
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 66

Conread position: 154-613
Cow position:
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 58

Conread position: 172-625
Cow position:
Alignm length: 471
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 38

Conread position: 173-469
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 152, 37

Conread position: 175-515
Cow position:
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 179-574
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 31

Conread position: 184-613
Cow position:
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 30

Conread position: 204-587
Cow position:
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 46

Conread position: 217-604
Cow position:
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 37

Conread position: 219-601
Cow position:
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 219-601
Cow position:
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 219-613
Cow position:
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 36

Conread position: 219-625
Cow position:
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 35

Conread position: 219-625
Cow position:
Alignm length: 421
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 35

Conread position: 221-534
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 38

Conread position: 227-601
Cow position:
Alignm length: 393
Alignm identity: 259
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 16

Conread position: 244-613
Cow position:
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 243

Conread position: 248-542
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 252-566
Cow position:
Alignm length: 325
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 47

Conread position: 252-610
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 253-488
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 253-587
Cow position:
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 242

Conread position: 253-601
Cow position:
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 307

Conread position: 253-601
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 253-613
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 68

Conread position: 256-604
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 256-613
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 143, 19

Conread position: 268-595
Cow position:
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 65

Conread position: 268-601
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 268-612
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 295-624
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 332

Conread position: 326-613
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 271

Conread position: 327-623
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 109

Conread position: 335-625
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 41

Conread position: 340-612
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 189, 52

Conread position: 351-625
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 46, 115

Show alignments to all cow chromosomes.