Cow genome map
| Conread name: | rtra03_h21r1.y1 |
| Conread position: | 1-464 |
| Cow position: | chr21:4566817-4567274 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 323 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 5-613 |
| Cow position: | chr21:30857790-30858406 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 6-312 |
| Cow position: | chr21:44532026-44532310 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 6-376 |
| Cow position: | chr21:15548075-15547711 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 6-596 |
| Cow position: | chr21:17143509-17144114 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 7-625 |
| Cow position: | chr21:21026331-21026928 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 9-574 |
| Cow position: | chr21:22943650-22944210 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 11-587 |
| Cow position: | chr21:21941714-21941142 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 11-604 |
| Cow position: | chr21:30967106-30966509 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 13-288 |
| Cow position: | chr21:4880595-4880332 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 13-312 |
| Cow position: | chr21:4586863-4586574 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 13-331 |
| Cow position: | chr21:3923100-3923411 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-367 |
| Cow position: | chr21:15398137-15397797 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-368 |
| Cow position: | chr21:47976846-47977196 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-370 |
| Cow position: | chr21:23340841-23340489 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-471 |
| Cow position: | chr21:22750614-22750156 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 13-472 |
| Cow position: | chr21:34656794-34657242 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 13-585 |
| Cow position: | chr21:27608878-27608289 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 13-585 |
| Cow position: | chr21:30596251-30595677 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-585 |
| Cow position: | chr21:33256393-33256969 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 154 |
| Conread position: | 13-585 |
| Cow position: | chr21:47648176-47648753 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-594 |
| Cow position: | chr21:10853103-10853689 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 13-595 |
| Cow position: | chr21:27148715-27148127 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-595 |
| Cow position: | chr21:30564589-30565176 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 13-596 |
| Cow position: | chr21:148986-149573 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:1195376-1195964 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:3781613-3782199 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 13-596 |
| Cow position: | chr21:10570123-10570713 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:13112554-13111972 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:26400928-26400340 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:27066763-27066173 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:27286791-27287402 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 159 |
| Conread position: | 13-596 |
| Cow position: | chr21:28916134-28915549 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:31513431-31512844 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 13-596 |
| Cow position: | chr21:33317530-33316940 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr21:42916630-42917219 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 13-601 |
| Cow position: | chr21:4899126-4898533 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr21:6966634-6966041 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 13-601 |
| Cow position: | chr21:11508775-11509372 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 205 |
| Conread position: | 13-601 |
| Cow position: | chr21:19352024-19351430 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr21:35024217-35024793 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 13-601 |
| Cow position: | chr21:36375826-36376421 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 156 |
| Conread position: | 13-604 |
| Cow position: | chr21:27620657-27620068 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 13-604 |
| Cow position: | chr21:28258509-28259103 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-604 |
| Cow position: | chr21:37374063-37374640 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 172 |
| Conread position: | 13-604 |
| Cow position: | chr21:39428239-39428836 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 13-604 |
| Cow position: | chr21:44763123-44762535 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 13-604 |
| Cow position: | chr21:48530012-48530600 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 13-605 |
| Cow position: | chr21:2513685-2514286 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-605 |
| Cow position: | chr21:5019982-5020581 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-612 |
| Cow position: | chr21:2419036-2419641 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 13-612 |
| Cow position: | chr21:13314295-13314894 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 13-613 |
| Cow position: | chr21:24083515-24082916 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 13-613 |
| Cow position: | chr21:31251835-31252430 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 211 |
| Conread position: | 13-613 |
| Cow position: | chr21:36978076-36977486 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 200 |
| Conread position: | 14-301 |
| Cow position: | chr21:4717775-4718045 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 14-311 |
| Cow position: | chr21:995598-995322 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 14-336 |
| Cow position: | chr21:37355135-37354825 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 14-527 |
| Cow position: | chr21:46975234-46974740 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 14-572 |
| Cow position: | chr21:24948954-24949509 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 197 |
| Conread position: | 14-596 |
| Cow position: | chr21:22854759-22855339 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 199 |
| Conread position: | 14-597 |
| Cow position: | chr21:27429280-27428691 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 14-613 |
| Cow position: | chr21:5631147-5630578 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 396 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 14-613 |
| Cow position: | chr21:26699826-26699225 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 14-613 |
| Cow position: | chr21:33984449-33983832 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 14-613 |
| Cow position: | chr21:33998681-33998076 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 14-614 |
| Cow position: | chr21:27125886-27125274 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 204 |
| Conread position: | 14-615 |
| Cow position: | chr21:4078882-4079468 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 180 |
| Conread position: | 14-624 |
| Cow position: | chr21:47361330-47360717 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 14-625 |
| Cow position: | chr21:24886493-24887099 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 198 |
| Conread position: | 15-472 |
| Cow position: | chr21:27523069-27522604 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 15-596 |
| Cow position: | chr21:2878987-2878414 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 15-601 |
| Cow position: | chr21:41796882-41796290 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 15-613 |
| Cow position: | chr21:13299680-13300267 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 17-613 |
| Cow position: | chr21:6864711-6864115 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 19-523 |
| Cow position: | chr21:35390302-35389801 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 19-576 |
| Cow position: | chr21:20578536-20577985 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 192 |
| Conread position: | 19-587 |
| Cow position: | chr21:5010630-5010055 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 19-613 |
| Cow position: | chr21:49648127-49647526 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 21-579 |
| Cow position: | chr21:29254352-29253787 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 195 |
| Conread position: | 22-610 |
| Cow position: | chr21:21918339-21918932 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 24-410 |
| Cow position: | chr21:30555247-30554872 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 24-542 |
| Cow position: | chr21:2523787-2524292 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 356 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 24-587 |
| Cow position: | chr21:37085987-37086544 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 358 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 25-581 |
| Cow position: | chr21:79157-78622 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 361 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 325, 16 |
| Conread position: | 25-601 |
| Cow position: | chr21:39470917-39470333 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 187 |
| Conread position: | 26-481 |
| Cow position: | chr21:1285406-1284951 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 186 |
| Conread position: | 28-601 |
| Cow position: | chr21:26634372-26633799 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 68 |
| Conread position: | 30-303 |
| Cow position: | chr21:33663143-33663402 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 43-491 |
| Cow position: | chr21:28025792-28026232 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 141 |
| Conread position: | 48-372 |
| Cow position: | chr21:13010651-13010964 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 48-604 |
| Cow position: | chr21:4813466-4812904 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 48-604 |
| Cow position: | chr21:24827260-24826700 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 48-613 |
| Cow position: | chr21:13162316-13162875 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 48-623 |
| Cow position: | chr21:22463060-22463643 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 164 |
| Conread position: | 63-601 |
| Cow position: | chr21:26757842-26757292 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 105 |
| Conread position: | 63-612 |
| Cow position: | chr21:48292457-48291911 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 64-625 |
| Cow position: | chr21:44293423-44292838 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 391 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 188 |
| Conread position: | 66-613 |
| Cow position: | chr21:32203130-32203681 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 141 |
| Conread position: | 73-310 |
| Cow position: | chr21:32300007-32300234 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 75-567 |
| Cow position: | chr21:25814494-25813999 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 136 |
| Conread position: | 76-613 |
| Cow position: | chr21:9895268-9895805 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 86-312 |
| Cow position: | chr21:26249-26033 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 90-612 |
| Cow position: | chr21:7155307-7155830 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 96-312 |
| Cow position: | chr21:18979724-18979932 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 117 |
| Conread position: | 103-481 |
| Cow position: | chr21:17060990-17060621 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 104-601 |
| Cow position: | chr21:34181168-34180666 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 106-523 |
| Cow position: | chr21:33358320-33357924 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 223, 75 |
| Conread position: | 106-574 |
| Cow position: | chr21:26830216-26830673 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 141, 33 |
| Conread position: | 112-384 |
| Cow position: | chr21:2555663-2555398 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 122-594 |
| Cow position: | chr21:4733582-4733107 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 126-312 |
| Cow position: | chr21:4097552-4097728 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 131-613 |
| Cow position: | chr21:16899248-16899732 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 41 |
| Conread position: | 131-615 |
| Cow position: | chr21:6622782-6623256 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 41 |
| Conread position: | 135-471 |
| Cow position: | chr21:12325041-12325370 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 192, 75 |
| Conread position: | 135-562 |
| Cow position: | chr21:30654532-30654959 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 138-613 |
| Cow position: | chr21:3804816-3804337 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 34 |
| Conread position: | 140-604 |
| Cow position: | chr21:27375094-27375540 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 321 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 142-595 |
| Cow position: | chr21:29212499-29212951 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 17 |
| Conread position: | 145-613 |
| Cow position: | chr21:32533786-32534269 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 65 |
| Conread position: | 147-508 |
| Cow position: | chr21:30162233-30161876 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 210, 63 |
| Conread position: | 154-601 |
| Cow position: | chr21:5642857-5642408 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 167-378 |
| Cow position: | chr21:27625342-27625131 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 173-576 |
| Cow position: | chr21:38907185-38907586 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 219-475 |
| Cow position: | chr21:44639541-44639283 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 219-521 |
| Cow position: | chr21:44862528-44862217 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 27 |
| Conread position: | 219-586 |
| Cow position: | chr21:45790152-45790520 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 105, 37 |
| Conread position: | 219-604 |
| Cow position: | chr21:4560030-4559636 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 219-612 |
| Cow position: | chr21:14726735-14727129 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 219-612 |
| Cow position: | chr21:27343361-27342956 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 219-612 |
| Cow position: | chr21:33420938-33420529 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 219-613 |
| Cow position: | chr21:33307021-33307408 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 178, 29 |
| Conread position: | 219-620 |
| Cow position: | chr21:23501620-23501225 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 180, 38 |
| Conread position: | 220-596 |
| Cow position: | chr21:12152869-12153251 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 37 |
| Conread position: | 229-589 |
| Cow position: | chr21:45640262-45639887 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 233-613 |
| Cow position: | chr21:32895171-32894780 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 253-601 |
| Cow position: | chr21:33710432-33710069 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 307 |
| Conread position: | 253-601 |
| Cow position: | chr21:34823243-34823607 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 253-625 |
| Cow position: | chr21:37323732-37323350 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 247 |
| Conread position: | 256-550 |
| Cow position: | chr21:25521258-25520953 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 122 |
| Conread position: | 256-576 |
| Cow position: | chr21:21623350-21623682 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 259-596 |
| Cow position: | chr21:36535135-36534782 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 263-612 |
| Cow position: | chr21:2935786-2935432 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 266-576 |
| Cow position: | chr21:14122380-14122058 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 274-587 |
| Cow position: | chr21:10042453-10042779 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 298 |
| Conread position: | 280-604 |
| Cow position: | chr21:32396926-32396592 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 203 |
| Conread position: | 280-612 |
| Cow position: | chr21:18792348-18791997 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 298-574 |
| Cow position: | chr21:34550541-34550255 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 262 |
| Conread position: | 298-615 |
| Cow position: | chr21:22719983-22719653 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 275 |
| Conread position: | 301-615 |
| Cow position: | chr21:33728228-33728552 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 341-624 |
| Cow position: | chr21:25472356-25472652 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 288 |
| Conread position: | 349-558 |
| Cow position: | chr21:13189101-13189321 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 355-613 |
| Cow position: | chr21:48261991-48262259 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 44 |
Show alignments to all cow chromosomes.