Cow genome map

Conread name: rtra03_h21r1.y1

Conread position: 1-311
Cow position:
Alignm length: 313
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 17

Conread position: 6-596
Cow position:
Alignm length: 605
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 6-613
Cow position:
Alignm length: 625
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 8-624
Cow position:
Alignm length: 628
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 11-601
Cow position:
Alignm length: 606
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 11-620
Cow position:
Alignm length: 625
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 13-298
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-331
Cow position:
Alignm length: 322
Alignm identity: 233
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 28, 51

Conread position: 13-375
Cow position:
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 137

Conread position: 13-427
Cow position:
Alignm length: 422
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-488
Cow position:
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 13-498
Cow position:
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 79

Conread position: 13-498
Cow position:
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-543
Cow position:
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-581
Cow position:
Alignm length: 599
Alignm identity: 385
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 91

Conread position: 13-585
Cow position:
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-595
Cow position:
Alignm length: 603
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 615
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 212

Conread position: 13-596
Cow position:
Alignm length: 614
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 598
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 605
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 13-601
Cow position:
Alignm length: 626
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 217

Conread position: 13-601
Cow position:
Alignm length: 617
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position:
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 158

Conread position: 13-604
Cow position:
Alignm length: 613
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 164

Conread position: 13-604
Cow position:
Alignm length: 609
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-606
Cow position:
Alignm length: 618
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 13-613
Cow position:
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-615
Cow position:
Alignm length: 621
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 13-623
Cow position:
Alignm length: 635
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 195

Conread position: 13-625
Cow position:
Alignm length: 629
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 71

Conread position: 14-499
Cow position:
Alignm length: 525
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 23

Conread position: 14-609
Cow position:
Alignm length: 614
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 14-609
Cow position:
Alignm length: 613
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Conread position: 14-625
Cow position:
Alignm length: 626
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 198

Conread position: 16-615
Cow position:
Alignm length: 623
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 22-613
Cow position:
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 71

Conread position: 40-469
Cow position:
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 180

Conread position: 70-324
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 152

Conread position: 90-604
Cow position:
Alignm length: 532
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 77

Conread position: 102-596
Cow position:
Alignm length: 511
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 121-601
Cow position:
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 135-551
Cow position:
Alignm length: 446
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 146-581
Cow position:
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 64

Conread position: 154-613
Cow position:
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 155-587
Cow position:
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 55

Conread position: 172-469
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 148, 38

Conread position: 172-612
Cow position:
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 38

Conread position: 185-596
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 25

Conread position: 215-604
Cow position:
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 38

Conread position: 219-493
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 101, 34

Conread position: 219-612
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 12

Conread position: 219-613
Cow position:
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 38

Conread position: 252-598
Cow position:
Alignm length: 360
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 77, 176

Conread position: 254-455
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 59

Conread position: 259-612
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 233

Conread position: 260-601
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 260-625
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 264-614
Cow position:
Alignm length: 364
Alignm identity: 247
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 69, 39

Conread position: 271-596
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 281-576
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 198

Conread position: 321-625
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 8

Conread position: 334-571
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 157

Conread position: 349-625
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 194

Show alignments to all cow chromosomes.