Cow genome map

Conread name: rtra03_h21r1.y1

Conread position: 1-601
Cow position: chr4:32214537-32215142 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 24

Conread position: 1-625
Cow position: chr4:33703-33082 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 8

Conread position: 4-253
Cow position: chr4:12915335-12915571 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 93, 9

Conread position: 4-587
Cow position: chr4:9356622-9357210 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 165

Conread position: 6-596
Cow position: chr4:29531072-29530474 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 215

Conread position: 6-612
Cow position: chr4:8673120-8673737 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 7-424
Cow position: chr4:14818540-14818131 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 34

Conread position: 9-613
Cow position: chr4:21973275-21972693 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 9-624
Cow position: chr4:67601271-67600660 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 10-596
Cow position: chr4:67393622-67394210 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 10

Conread position: 11-303
Cow position: chr4:38901718-38901438 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 8

Conread position: 11-303
Cow position: chr4:38907880-38908160 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 8

Conread position: 11-595
Cow position: chr4:17920567-17919972 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 206

Conread position: 11-596
Cow position: chr4:12238833-12238251 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 11-613
Cow position: chr4:68809528-68810121 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 12-485
Cow position: chr4:8935006-8935484 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 200

Conread position: 13-302
Cow position: chr4:42589233-42588958 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 28

Conread position: 13-331
Cow position: chr4:17539610-17539309 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 44

Conread position: 13-342
Cow position: chr4:5442111-5441789 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-351
Cow position: chr4:3355567-3355237 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-372
Cow position: chr4:161560-161911 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 19

Conread position: 13-372
Cow position: chr4:49744168-49744523 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-378
Cow position: chr4:10122028-10121670 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 28

Conread position: 13-410
Cow position: chr4:22904116-22904494 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 26

Conread position: 13-410
Cow position: chr4:45269018-45268626 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 13-410
Cow position: chr4:56014221-56013828 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-445
Cow position: chr4:5486999-5486561 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 202

Conread position: 13-447
Cow position: chr4:62558175-62557738 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-449
Cow position: chr4:30578120-30578559 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-472
Cow position: chr4:13464206-13464667 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-493
Cow position: chr4:30473827-30474310 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-504
Cow position: chr4:14141511-14141990 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 13-505
Cow position: chr4:15815101-15814610 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 13-517
Cow position: chr4:63000534-63001038 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-534
Cow position: chr4:16061674-16062207 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-546
Cow position: chr4:5579398-5578861 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 198

Conread position: 13-564
Cow position: chr4:43897311-43896758 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 13-572
Cow position: chr4:358277-358842 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 209

Conread position: 13-576
Cow position: chr4:4378785-4379345 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-578
Cow position: chr4:1437104-1436520 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 96

Conread position: 13-585
Cow position: chr4:3128215-3128785 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 13-585
Cow position: chr4:36026877-36026301 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-585
Cow position: chr4:43317256-43316679 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 13-585
Cow position: chr4:61951878-61952465 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 228

Conread position: 13-586
Cow position: chr4:67382680-67383252 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-587
Cow position: chr4:40217235-40217810 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 13-587
Cow position: chr4:47056033-47055454 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-595
Cow position: chr4:3069315-3069896 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 156

Conread position: 13-595
Cow position: chr4:9005339-9004750 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-595
Cow position: chr4:17034109-17033519 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:2350323-2349736 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:3449189-3449785 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 13-596
Cow position: chr4:6266820-6266233 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:6487976-6487385 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 158

Conread position: 13-596
Cow position: chr4:16362598-16363183 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 13-596
Cow position: chr4:17876362-17876940 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:20657666-20657078 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 13-596
Cow position: chr4:23304946-23304358 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 71

Conread position: 13-596
Cow position: chr4:27177221-27177809 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:33070448-33069856 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:36898770-36899359 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:41957156-41957744 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 106

Conread position: 13-596
Cow position: chr4:41961291-41961879 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 106

Conread position: 13-596
Cow position: chr4:46712203-46711623 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position: chr4:61241675-61242264 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-599
Cow position: chr4:22074670-22074097 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 37

Conread position: 13-601
Cow position: chr4:606004-606593 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position: chr4:4418443-4419034 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-601
Cow position: chr4:6863838-6863243 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 156

Conread position: 13-601
Cow position: chr4:9040338-9040934 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 13-601
Cow position: chr4:17234420-17235009 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position: chr4:18336553-18335962 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 121

Conread position: 13-601
Cow position: chr4:29605081-29604486 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position: chr4:41473448-41472842 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 210

Conread position: 13-601
Cow position: chr4:44778800-44778204 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-603
Cow position: chr4:33021239-33020642 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 129

Conread position: 13-604
Cow position: chr4:8677196-8677792 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position: chr4:21844126-21843529 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 13-604
Cow position: chr4:25597093-25596494 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position: chr4:33495954-33496552 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-612
Cow position: chr4:15874230-15873633 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 117

Conread position: 13-613
Cow position: chr4:12606486-12605872 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 13-613
Cow position: chr4:44900667-44901255 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 219

Conread position: 13-625
Cow position: chr4:26467650-26468242 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 114

Conread position: 13-625
Cow position: chr4:55272532-55273163 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 249

Conread position: 14-292
Cow position: chr4:35791548-35791279 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 199

Conread position: 14-382
Cow position: chr4:43834760-43835121 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 12, 203

Conread position: 14-410
Cow position: chr4:16606542-16606932 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 160

Conread position: 14-498
Cow position: chr4:21361918-21362398 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 62

Conread position: 14-597
Cow position: chr4:37702665-37703239 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 96

Conread position: 14-604
Cow position: chr4:20242554-20243147 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 156

Conread position: 14-613
Cow position: chr4:1240024-1239422 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 188

Conread position: 14-613
Cow position: chr4:41977252-41976644 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 162

Conread position: 14-613
Cow position: chr4:60650985-60651593 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 199

Conread position: 14-623
Cow position: chr4:58882984-58882373 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 14-625
Cow position: chr4:17834460-17833829 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 205

Conread position: 15-370
Cow position: chr4:63820662-63820996 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 68

Conread position: 15-610
Cow position: chr4:28834962-28835557 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 23

Conread position: 15-613
Cow position: chr4:1028829-1028233 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 207

Conread position: 16-301
Cow position: chr4:5574485-5574756 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 137

Conread position: 16-452
Cow position: chr4:33646170-33645759 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 304
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 80

Conread position: 16-613
Cow position: chr4:11108678-11108078 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 16-614
Cow position: chr4:19236477-19237068 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 18-612
Cow position: chr4:54148007-54147416 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 147

Conread position: 19-301
Cow position: chr4:10542045-10541773 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 73, 192

Conread position: 19-458
Cow position: chr4:40438129-40437686 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 289
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 172

Conread position: 19-596
Cow position: chr4:67681595-67680994 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 19-612
Cow position: chr4:34176593-34175981 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 193

Conread position: 19-625
Cow position: chr4:55510435-55509844 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 193

Conread position: 22-454
Cow position: chr4:11391081-11390654 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 107

Conread position: 22-534
Cow position: chr4:64799514-64800030 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 156

Conread position: 22-575
Cow position: chr4:5611596-5611040 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 173

Conread position: 25-601
Cow position: chr4:31485577-31484994 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 144

Conread position: 31-581
Cow position: chr4:1187944-1187388 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 183

Conread position: 31-612
Cow position: chr4:10045355-10044768 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 101

Conread position: 40-615
Cow position: chr4:4674153-4673576 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 83

Conread position: 51-625
Cow position: chr4:34182294-34181724 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 53-613
Cow position: chr4:59334439-59333905 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 54-303
Cow position: chr4:9169724-9169491 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 119

Conread position: 57-329
Cow position: chr4:56961370-56961626 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 96

Conread position: 59-625
Cow position: chr4:8648510-8649085 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 101

Conread position: 63-596
Cow position: chr4:31562783-31562248 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 63-596
Cow position: chr4:57987188-57987728 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 105

Conread position: 68-393
Cow position: chr4:59317336-59317024 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 71

Conread position: 68-625
Cow position: chr4:45954126-45954689 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 69-301
Cow position: chr4:47749762-47749983 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 142

Conread position: 83-604
Cow position: chr4:38153813-38153313 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 90-405
Cow position: chr4:20642596-20642890 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 303, 56

Conread position: 90-601
Cow position: chr4:47263249-47263765 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 77

Conread position: 95-601
Cow position: chr4:7778877-7779388 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 96-445
Cow position: chr4:24021980-24021638 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 258, 39

Conread position: 96-612
Cow position: chr4:54189269-54189769 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 114

Conread position: 103-596
Cow position: chr4:34712294-34712800 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 64

Conread position: 103-596
Cow position: chr4:44733111-44733605 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 64

Conread position: 104-394
Cow position: chr4:22025649-22025379 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 104-601
Cow position: chr4:21341559-21342061 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 63

Conread position: 104-601
Cow position: chr4:58291227-58291729 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 63

Conread position: 106-604
Cow position: chr4:27336701-27337203 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 61

Conread position: 112-604
Cow position: chr4:27288603-27288113 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 112-625
Cow position: chr4:54932101-54931597 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 98

Conread position: 119-498
Cow position: chr4:532546-532927 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 48

Conread position: 120-605
Cow position: chr4:18301741-18301251 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 28

Conread position: 122-618
Cow position: chr4:65890306-65890798 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 45

Conread position: 126-511
Cow position: chr4:20184010-20184382 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 162, 37

Conread position: 129-587
Cow position: chr4:55669754-55670218 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 38

Conread position: 139-390
Cow position: chr4:25129298-25129542 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 28

Conread position: 142-329
Cow position: chr4:16832787-16832967 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 85

Conread position: 142-612
Cow position: chr4:18097087-18096611 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 50

Conread position: 147-608
Cow position: chr4:65430811-65431277 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 63

Conread position: 153-613
Cow position: chr4:23452477-23452016 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 57

Conread position: 153-613
Cow position: chr4:49697579-49697107 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 322
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 65

Conread position: 172-601
Cow position: chr4:21298227-21297793 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 38

Conread position: 215-613
Cow position: chr4:27539260-27539663 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 33

Conread position: 216-601
Cow position: chr4:18266684-18267080 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 37

Conread position: 219-472
Cow position: chr4:35867812-35868078 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 29

Conread position: 219-585
Cow position: chr4:64875428-64875057 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 34

Conread position: 219-587
Cow position: chr4:17821125-17821502 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 219-596
Cow position: chr4:3169876-3170265 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 219-596
Cow position: chr4:10823271-10822885 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 34

Conread position: 219-596
Cow position: chr4:43883689-43884076 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 34

Conread position: 219-597
Cow position: chr4:6168372-6167989 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 219-610
Cow position: chr4:38180361-38180754 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 219-613
Cow position: chr4:37785897-37786302 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 33

Conread position: 219-613
Cow position: chr4:48502451-48502845 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 27

Conread position: 219-615
Cow position: chr4:26745116-26745521 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 36

Conread position: 219-624
Cow position: chr4:22316324-22316735 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 34

Conread position: 219-625
Cow position: chr4:66174723-66174310 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 23

Conread position: 224-613
Cow position: chr4:3252957-3252544 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 350

Conread position: 225-625
Cow position: chr4:43841371-43840968 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 110, 26

Conread position: 226-625
Cow position: chr4:44957809-44957397 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 27

Conread position: 242-569
Cow position: chr4:42862803-42863143 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 75, 251

Conread position: 243-604
Cow position: chr4:47751943-47752322 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 14

Conread position: 252-585
Cow position: chr4:19206320-19206665 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 76, 233

Conread position: 252-612
Cow position: chr4:25227831-25228191 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 21

Conread position: 252-613
Cow position: chr4:20027899-20027521 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 105, 74

Conread position: 253-522
Cow position: chr4:55519891-55520176 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 253-596
Cow position: chr4:18813585-18813227 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 22

Conread position: 253-601
Cow position: chr4:48732301-48732664 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 248

Conread position: 259-616
Cow position: chr4:26911411-26911784 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 266-596
Cow position: chr4:65918329-65918672 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 7

Conread position: 268-468
Cow position: chr4:9796948-9796737 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 268-596
Cow position: chr4:42331082-42330738 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 274-498
Cow position: chr4:23438120-23437886 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 275-613
Cow position: chr4:14918704-14919057 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 282-596
Cow position: chr4:25971618-25971935 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 39

Conread position: 295-576
Cow position: chr4:44647084-44646787 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 177

Conread position: 300-609
Cow position: chr4:11100923-11100598 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 214

Conread position: 302-616
Cow position: chr4:106197-105878 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 13

Conread position: 323-613
Cow position: chr4:65581211-65581515 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 327-613
Cow position: chr4:59356196-59355905 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 176

Conread position: 339-613
Cow position: chr4:12454687-12454964 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 97

Conread position: 349-576
Cow position: chr4:29528536-29528303 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 50

Conread position: 351-613
Cow position: chr4:13254398-13254664 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 91

Show alignments to all cow chromosomes.