Cow genome map
| Conread name: | rtra03_h21r1.y1 |
| Conread position: | 1-603 |
| Cow position: | chr5:37379564-37380177 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 170 |
| Conread position: | 4-435 |
| Cow position: | chr5:29826854-29827285 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 5-613 |
| Cow position: | chr5:58013321-58012706 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 7-448 |
| Cow position: | chr5:15361652-15362094 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 7-610 |
| Cow position: | chr5:48534349-48534949 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 9-385 |
| Cow position: | chr5:57124004-57124362 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 9-499 |
| Cow position: | chr5:28222736-28222257 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 9-517 |
| Cow position: | chr5:49131697-49132207 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 9-596 |
| Cow position: | chr5:58198500-58199093 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 160 |
| Conread position: | 9-622 |
| Cow position: | chr5:25901978-25901366 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 11-462 |
| Cow position: | chr5:46003159-46002703 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 159 |
| Conread position: | 11-576 |
| Cow position: | chr5:68256047-68255484 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 359 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 140 |
| Conread position: | 11-596 |
| Cow position: | chr5:49117859-49117268 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 11-610 |
| Cow position: | chr5:40791343-40791933 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 11-613 |
| Cow position: | chr5:29768567-29769160 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 11-620 |
| Cow position: | chr5:48409973-48409336 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 11-625 |
| Cow position: | chr5:67653824-67654437 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 12-574 |
| Cow position: | chr5:18884087-18883548 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 13-215 |
| Cow position: | chr5:70401400-70401603 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 13-331 |
| Cow position: | chr5:47342208-47342516 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 43 |
| Conread position: | 13-338 |
| Cow position: | chr5:32775306-32775624 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-379 |
| Cow position: | chr5:27549965-27549605 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 13-391 |
| Cow position: | chr5:10513780-10513407 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-397 |
| Cow position: | chr5:13808180-13807806 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-472 |
| Cow position: | chr5:59083731-59083280 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-473 |
| Cow position: | chr5:445014-445473 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 13-474 |
| Cow position: | chr5:8177602-8178065 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-475 |
| Cow position: | chr5:58462243-58462694 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 13-476 |
| Cow position: | chr5:20778197-20777753 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 13-478 |
| Cow position: | chr5:5716556-5716093 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 13-486 |
| Cow position: | chr5:18119985-18119509 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-489 |
| Cow position: | chr5:4755229-4754756 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 13-493 |
| Cow position: | chr5:413210-412734 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 13-563 |
| Cow position: | chr5:57336920-57336362 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 13-567 |
| Cow position: | chr5:61232312-61231761 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 13-571 |
| Cow position: | chr5:23829676-23829117 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-572 |
| Cow position: | chr5:41066518-41067082 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-572 |
| Cow position: | chr5:73486429-73485842 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-573 |
| Cow position: | chr5:5925467-5924908 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-573 |
| Cow position: | chr5:26076706-26076143 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 13-574 |
| Cow position: | chr5:42507253-42507817 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 13-575 |
| Cow position: | chr5:29743063-29742497 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 13-583 |
| Cow position: | chr5:48805956-48805383 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 13-586 |
| Cow position: | chr5:7276327-7276903 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-587 |
| Cow position: | chr5:4435011-4434432 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-587 |
| Cow position: | chr5:4963882-4963315 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 13-587 |
| Cow position: | chr5:10067053-10066478 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 13-594 |
| Cow position: | chr5:44709886-44709291 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 13-595 |
| Cow position: | chr5:6772061-6772648 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-595 |
| Cow position: | chr5:18558909-18558321 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-595 |
| Cow position: | chr5:48025771-48026350 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 13-596 |
| Cow position: | chr5:1339430-1338838 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 200 |
| Conread position: | 13-596 |
| Cow position: | chr5:2916959-2917545 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:3501634-3501045 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:3788721-3789311 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:4387678-4388262 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:6152332-6151749 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 13-596 |
| Cow position: | chr5:7395752-7396331 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:9003617-9003027 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:19979422-19978831 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:24298507-24299096 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 13-596 |
| Cow position: | chr5:30581831-30582409 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 13-596 |
| Cow position: | chr5:32755950-32755361 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:37734867-37735459 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 13-596 |
| Cow position: | chr5:46735786-46735193 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 202 |
| Conread position: | 13-596 |
| Cow position: | chr5:46779011-46779599 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 13-596 |
| Cow position: | chr5:47561063-47560478 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:51166813-51166226 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:52823713-52823124 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:58771376-58770788 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-596 |
| Cow position: | chr5:64779510-64778919 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 13-597 |
| Cow position: | chr5:12729644-12729076 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:4016388-4015784 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:6585967-6585365 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:6615799-6615205 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:11632492-11631897 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:23957833-23957238 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:29633922-29634517 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-601 |
| Cow position: | chr5:45180599-45179999 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 160 |
| Conread position: | 13-601 |
| Cow position: | chr5:46666572-46667162 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 13-601 |
| Cow position: | chr5:54928419-54927831 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 13-601 |
| Cow position: | chr5:59063938-59064532 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-604 |
| Cow position: | chr5:3970016-3970616 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 194 |
| Conread position: | 13-604 |
| Cow position: | chr5:14543808-14543210 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-604 |
| Cow position: | chr5:27196586-27195971 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-604 |
| Cow position: | chr5:49221999-49221402 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 13-604 |
| Cow position: | chr5:51745716-51746315 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 13-610 |
| Cow position: | chr5:31120713-31120109 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 13-612 |
| Cow position: | chr5:31098760-31098145 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 167 |
| Conread position: | 13-613 |
| Cow position: | chr5:55833354-55832735 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 211 |
| Conread position: | 13-616 |
| Cow position: | chr5:46671100-46671714 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 207 |
| Conread position: | 13-625 |
| Cow position: | chr5:27178141-27178747 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 13-625 |
| Cow position: | chr5:39245790-39245187 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 202 |
| Conread position: | 14-286 |
| Cow position: | chr5:21786200-21785939 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 14-301 |
| Cow position: | chr5:27173150-27173421 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 14-303 |
| Cow position: | chr5:70531914-70531638 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 14-314 |
| Cow position: | chr5:38737292-38737579 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 14-378 |
| Cow position: | chr5:57928877-57928518 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 171 |
| Conread position: | 14-399 |
| Cow position: | chr5:40347786-40347406 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 198 |
| Conread position: | 14-457 |
| Cow position: | chr5:2706397-2705946 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 202 |
| Conread position: | 14-467 |
| Cow position: | chr5:23684877-23684432 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 14-473 |
| Cow position: | chr5:70127288-70127728 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 14-476 |
| Cow position: | chr5:41979970-41980427 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 14-476 |
| Cow position: | chr5:59278638-59279099 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 27, 206 |
| Conread position: | 14-479 |
| Cow position: | chr5:54695305-54694841 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 14-499 |
| Cow position: | chr5:12680095-12679600 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 169 |
| Conread position: | 14-502 |
| Cow position: | chr5:39448937-39448451 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 180 |
| Conread position: | 14-570 |
| Cow position: | chr5:59770543-59771102 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 14-575 |
| Cow position: | chr5:12502676-12502106 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 14-576 |
| Cow position: | chr5:26057625-26058182 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 14-579 |
| Cow position: | chr5:27490455-27491039 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 378 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 215 |
| Conread position: | 14-587 |
| Cow position: | chr5:63313016-63312446 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 14-612 |
| Cow position: | chr5:8997534-8996907 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 207 |
| Conread position: | 14-612 |
| Cow position: | chr5:68337997-68337402 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 14-612 |
| Cow position: | chr5:72346621-72345998 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 215 |
| Conread position: | 14-613 |
| Cow position: | chr5:32165418-32164826 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 394 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 14-613 |
| Cow position: | chr5:34191418-34192022 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 14-613 |
| Cow position: | chr5:46626771-46626176 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 14-625 |
| Cow position: | chr5:4349502-4348878 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 14-625 |
| Cow position: | chr5:25929195-25928586 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 185 |
| Conread position: | 14-625 |
| Cow position: | chr5:73443906-73444511 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 29 |
| Conread position: | 15-484 |
| Cow position: | chr5:57614676-57614225 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 15-613 |
| Cow position: | chr5:7141605-7141000 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 16-590 |
| Cow position: | chr5:48226077-48225499 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 19-477 |
| Cow position: | chr5:18704158-18704622 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 191 |
| Conread position: | 19-477 |
| Cow position: | chr5:21522236-21521772 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 194 |
| Conread position: | 19-579 |
| Cow position: | chr5:49755825-49755261 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 19-601 |
| Cow position: | chr5:72856373-72856962 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 19-613 |
| Cow position: | chr5:40897828-40897252 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 29 |
| Conread position: | 20-612 |
| Cow position: | chr5:3252636-3252059 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 149 |
| Conread position: | 20-625 |
| Cow position: | chr5:62160430-62159814 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 22-373 |
| Cow position: | chr5:64010352-64010013 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 23-578 |
| Cow position: | chr5:9091915-9091358 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 189 |
| Conread position: | 24-595 |
| Cow position: | chr5:49521224-49521786 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 24-604 |
| Cow position: | chr5:54786602-54786017 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 24-615 |
| Cow position: | chr5:46686103-46685513 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 25-477 |
| Cow position: | chr5:37084368-37083913 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 144 |
| Conread position: | 25-625 |
| Cow position: | chr5:64845752-64845156 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 149 |
| Conread position: | 26-390 |
| Cow position: | chr5:3200856-3201217 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 188 |
| Conread position: | 26-577 |
| Cow position: | chr5:34525915-34526460 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 28-612 |
| Cow position: | chr5:41391240-41391830 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 40-596 |
| Cow position: | chr5:2976307-2976869 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 42-256 |
| Cow position: | chr5:3694667-3694879 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 120 |
| Conread position: | 42-397 |
| Cow position: | chr5:35207247-35206904 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 45-327 |
| Cow position: | chr5:27005627-27005890 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 47-409 |
| Cow position: | chr5:34472645-34472291 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 50, 169 |
| Conread position: | 48-399 |
| Cow position: | chr5:58000219-58000556 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 48-596 |
| Cow position: | chr5:57920453-57921001 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 165 |
| Conread position: | 50-596 |
| Cow position: | chr5:14637047-14636495 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 50-623 |
| Cow position: | chr5:32965531-32964949 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 51-611 |
| Cow position: | chr5:10543135-10542571 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 52-572 |
| Cow position: | chr5:22554667-22555193 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 159 |
| Conread position: | 53-477 |
| Cow position: | chr5:34219013-34218609 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 60-607 |
| Cow position: | chr5:58191462-58192015 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 63-601 |
| Cow position: | chr5:54930703-54930159 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 67-460 |
| Cow position: | chr5:28026007-28026398 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 67-562 |
| Cow position: | chr5:30844378-30844873 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 143 |
| Conread position: | 67-609 |
| Cow position: | chr5:27655300-27655839 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 33 |
| Conread position: | 68-311 |
| Cow position: | chr5:31134446-31134214 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 69-581 |
| Cow position: | chr5:42745325-42745834 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 73-292 |
| Cow position: | chr5:7809903-7809697 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 138 |
| Conread position: | 75-375 |
| Cow position: | chr5:31284652-31284946 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 75-454 |
| Cow position: | chr5:34905288-34905654 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 90-612 |
| Cow position: | chr5:27690570-27691088 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 55 |
| Conread position: | 91-569 |
| Cow position: | chr5:41952500-41952023 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 122 |
| Conread position: | 96-498 |
| Cow position: | chr5:5859537-5859948 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 96-527 |
| Cow position: | chr5:15316312-15316739 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 35 |
| Conread position: | 104-542 |
| Cow position: | chr5:13531307-13530878 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 225, 51 |
| Conread position: | 104-612 |
| Cow position: | chr5:52606035-52605526 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 107 |
| Conread position: | 106-499 |
| Cow position: | chr5:32089201-32088811 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 107-595 |
| Cow position: | chr5:6456073-6455581 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 6 |
| Conread position: | 111-610 |
| Cow position: | chr5:69519209-69519691 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 52 |
| Conread position: | 112-312 |
| Cow position: | chr5:46649677-46649868 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 114-625 |
| Cow position: | chr5:3440933-3441429 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 115-604 |
| Cow position: | chr5:62435723-62436214 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 116-499 |
| Cow position: | chr5:58244197-58243813 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 120-625 |
| Cow position: | chr5:9235798-9235295 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 90 |
| Conread position: | 121-573 |
| Cow position: | chr5:18900939-18901392 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 135-311 |
| Cow position: | chr5:55630392-55630555 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 150-587 |
| Cow position: | chr5:37625493-37625931 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 150-625 |
| Cow position: | chr5:47360851-47361327 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 60 |
| Conread position: | 159-612 |
| Cow position: | chr5:41229402-41228948 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 173-540 |
| Cow position: | chr5:6840566-6840196 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 187-625 |
| Cow position: | chr5:53834311-53834763 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 217-601 |
| Cow position: | chr5:24633345-24632951 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 217-624 |
| Cow position: | chr5:6986798-6986376 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 414 |
| Conread position: | 219-488 |
| Cow position: | chr5:46796381-46796660 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 219-572 |
| Cow position: | chr5:21221118-21220772 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 27 |
| Conread position: | 219-596 |
| Cow position: | chr5:21188917-21189304 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 219-601 |
| Cow position: | chr5:294960-295353 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 219-601 |
| Cow position: | chr5:710456-710063 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 219-613 |
| Cow position: | chr5:37424421-37424827 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 27 |
| Conread position: | 219-613 |
| Cow position: | chr5:54124787-54125198 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 219-625 |
| Cow position: | chr5:15454494-15454885 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 11 |
| Conread position: | 220-625 |
| Cow position: | chr5:48575118-48574711 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 221-601 |
| Cow position: | chr5:53076170-53075782 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 229-539 |
| Cow position: | chr5:49970544-49970863 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 91, 24 |
| Conread position: | 230-410 |
| Cow position: | chr5:41293516-41293691 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 230-581 |
| Cow position: | chr5:38379064-38378716 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 252-527 |
| Cow position: | chr5:14655436-14655145 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 252-596 |
| Cow position: | chr5:26466369-26466721 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 255 |
| Conread position: | 253-480 |
| Cow position: | chr5:45702783-45703023 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 253-490 |
| Cow position: | chr5:15676640-15676890 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 253-604 |
| Cow position: | chr5:15761645-15761279 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 261 |
| Conread position: | 253-625 |
| Cow position: | chr5:49565302-49565681 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 253 |
| Conread position: | 254-569 |
| Cow position: | chr5:26120165-26120483 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 254-572 |
| Cow position: | chr5:70348132-70348464 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 255-570 |
| Cow position: | chr5:26348764-26348436 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 258-621 |
| Cow position: | chr5:1229535-1229913 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 244 |
| Conread position: | 259-587 |
| Cow position: | chr5:46817372-46817030 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 260-572 |
| Cow position: | chr5:13258333-13258658 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 262-576 |
| Cow position: | chr5:50166258-50166573 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 266-553 |
| Cow position: | chr5:34558881-34559175 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 150 |
| Conread position: | 269-604 |
| Cow position: | chr5:29256471-29256123 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 232 |
| Conread position: | 270-601 |
| Cow position: | chr5:18119234-18118887 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 279-610 |
| Cow position: | chr5:8479041-8479385 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 50, 109 |
| Conread position: | 280-601 |
| Cow position: | chr5:6125411-6125074 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 280-613 |
| Cow position: | chr5:14631511-14631165 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 288-625 |
| Cow position: | chr5:33776008-33775663 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 216 |
| Conread position: | 298-624 |
| Cow position: | chr5:27173492-27173819 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 318-490 |
| Cow position: | chr5:38737627-38737808 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 327-611 |
| Cow position: | chr5:17026878-17027175 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 199 |
| Conread position: | 328-581 |
| Cow position: | chr5:62759336-62759071 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 349-625 |
| Cow position: | chr5:5682687-5682400 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 278 |
| Conread position: | 349-625 |
| Cow position: | chr5:41357012-41356730 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 191 |
Show alignments to all cow chromosomes.