Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-594 |
| Cow position: | chr1:98656721-98657339 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 163 |
| Conread position: | 1-601 |
| Cow position: | chr1:31238998-31239626 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 286 |
| Conread position: | 4-378 |
| Cow position: | chr1:11018664-11018274 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 188 |
| Conread position: | 4-458 |
| Cow position: | chr1:91673461-91672981 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-564 |
| Cow position: | chr1:61203613-61203023 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 151 |
| Conread position: | 4-600 |
| Cow position: | chr1:68602401-68603023 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 290 |
| Conread position: | 4-601 |
| Cow position: | chr1:9261738-9261104 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 4-601 |
| Cow position: | chr1:61563266-61562644 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 577 |
| Conread position: | 5-450 |
| Cow position: | chr1:16797868-16798342 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 6-434 |
| Cow position: | chr1:86326649-86327113 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 308 |
| Conread position: | 15-595 |
| Cow position: | chr1:81925964-81926554 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 308 |
| Conread position: | 20-601 |
| Cow position: | chr1:30065595-30064959 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 23-368 |
| Cow position: | chr1:81001148-81001505 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 32-558 |
| Cow position: | chr1:31724404-31724943 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 57-597 |
| Cow position: | chr1:29948651-29949204 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 288 |
| Conread position: | 106-601 |
| Cow position: | chr1:31400287-31400804 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 193 |
| Conread position: | 108-567 |
| Cow position: | chr1:77109008-77109477 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 55 |
| Conread position: | 114-303 |
| Cow position: | chr1:92881685-92881871 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 122-548 |
| Cow position: | chr1:43245551-43245969 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 67, 149 |
| Conread position: | 124-601 |
| Cow position: | chr1:29607998-29608501 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 145-601 |
| Cow position: | chr1:76860976-76861462 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 300 |
| Conread position: | 194-595 |
| Cow position: | chr1:22617389-22617800 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 211-443 |
| Cow position: | chr1:96194164-96194406 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 211-487 |
| Cow position: | chr1:98617469-98617185 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 211-594 |
| Cow position: | chr1:97003571-97003189 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 211-601 |
| Cow position: | chr1:34914598-34914205 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 211-601 |
| Cow position: | chr1:55328416-55328795 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 243-598 |
| Cow position: | chr1:84442018-84442389 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.