Cow genome map

Conread name: rtra04_c13r1.y1

Conread position: 1-471
Cow position: chr10:20446066-20445576 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 185

Conread position: 1-505
Cow position: chr10:21432501-21431972 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 358
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 47, 124

Conread position: 1-597
Cow position: chr10:40566925-40566312 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 150

Conread position: 1-597
Cow position: chr10:40697421-40698044 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 63

Conread position: 4-331
Cow position: chr10:28948734-28948401 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 4-416
Cow position: chr10:20112005-20111565 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 329

Conread position: 4-481
Cow position: chr10:61312738-61312250 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 4-492
Cow position: chr10:38941372-38940857 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 4-579
Cow position: chr10:20380734-20381345 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 4-599
Cow position: chr10:21449945-21450573 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 548

Conread position: 4-599
Cow position: chr10:31375162-31375773 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 270

Conread position: 4-601
Cow position: chr10:4501197-4500565 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 4-601
Cow position: chr10:20516166-20515544 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 4-601
Cow position: chr10:34664515-34665136 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 428

Conread position: 5-601
Cow position: chr10:15620134-15620758 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 544

Conread position: 5-601
Cow position: chr10:22646253-22645660 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 141

Conread position: 14-303
Cow position: chr10:24751146-24750839 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 28

Conread position: 15-444
Cow position: chr10:43848403-43847961 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 295
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 246

Conread position: 15-599
Cow position: chr10:17436511-17435912 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 285

Conread position: 20-447
Cow position: chr10:64301465-64301909 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 143

Conread position: 22-601
Cow position: chr10:22981060-22981650 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 385
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 47

Conread position: 23-243
Cow position: chr10:21414491-21414728 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 40-599
Cow position: chr10:39775793-39776377 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 8

Conread position: 86-601
Cow position: chr10:26670837-26670295 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 280

Conread position: 87-243
Cow position: chr10:41653523-41653694 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 94-600
Cow position: chr10:19542288-19542811 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 282

Conread position: 111-404
Cow position: chr10:35040141-35039833 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 222

Conread position: 178-601
Cow position: chr10:32830699-32830267 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 31

Conread position: 211-601
Cow position: chr10:49430672-49430271 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 212

Show alignments to all cow chromosomes.