Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-443 |
| Cow position: | chr11:11256962-11256498 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 1-586 |
| Cow position: | chr11:30190649-30190060 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 179 |
| Conread position: | 1-589 |
| Cow position: | chr11:49037502-49038098 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 283 |
| Conread position: | 4-243 |
| Cow position: | chr11:14260065-14260324 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-404 |
| Cow position: | chr11:48982182-48981762 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 4-449 |
| Cow position: | chr11:50949840-50949380 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 4-449 |
| Cow position: | chr11:59871708-59871235 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 438 |
| Conread position: | 4-523 |
| Cow position: | chr11:3495935-3495387 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-581 |
| Cow position: | chr11:18146654-18147246 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 4-582 |
| Cow position: | chr11:60757083-60757686 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 4-599 |
| Cow position: | chr11:10128873-10129477 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 4-599 |
| Cow position: | chr11:19061182-19061810 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-600 |
| Cow position: | chr11:12317178-12317808 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-600 |
| Cow position: | chr11:71332393-71331766 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 166 |
| Conread position: | 4-601 |
| Cow position: | chr11:26068227-26068798 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 4-601 |
| Cow position: | chr11:48740041-48740651 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 408 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 108, 32 |
| Conread position: | 4-601 |
| Cow position: | chr11:76371175-76371797 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 5-337 |
| Cow position: | chr11:1492957-1493312 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 49-247 |
| Cow position: | chr11:28381544-28381333 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 49-558 |
| Cow position: | chr11:82145810-82146328 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 58-597 |
| Cow position: | chr11:33041920-33042453 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 363 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 55, 338 |
| Conread position: | 84-330 |
| Cow position: | chr11:12411470-12411199 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 137-473 |
| Cow position: | chr11:10870251-10869893 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 165 |
| Conread position: | 207-462 |
| Cow position: | chr11:28667205-28666940 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 88 |
| Conread position: | 211-411 |
| Cow position: | chr11:3310628-3310427 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 211-483 |
| Cow position: | chr11:31531805-31531534 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 211-600 |
| Cow position: | chr11:14260382-14260784 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 105 |
| Conread position: | 213-601 |
| Cow position: | chr11:27938066-27937671 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 298 |
Show alignments to all cow chromosomes.