Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-243 |
| Cow position: | chr17:31311175-31311433 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-423 |
| Cow position: | chr17:602861-603302 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 292 |
| Conread position: | 1-425 |
| Cow position: | chr17:29156434-29155992 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 1-559 |
| Cow position: | chr17:14899778-14899198 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 1-601 |
| Cow position: | chr17:1654706-1655322 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 305 |
| Conread position: | 1-601 |
| Cow position: | chr17:20695263-20694629 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 396 |
| Conread position: | 4-435 |
| Cow position: | chr17:27978164-27977721 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 4-598 |
| Cow position: | chr17:3315134-3314533 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 4-600 |
| Cow position: | chr17:15853787-15853153 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 380 |
| Conread position: | 4-600 |
| Cow position: | chr17:25739349-25738730 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 4-601 |
| Cow position: | chr17:6122836-6122206 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-601 |
| Cow position: | chr17:22563198-22562577 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 166 |
| Conread position: | 4-601 |
| Cow position: | chr17:29075302-29075894 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 6-601 |
| Cow position: | chr17:15140288-15140914 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 445 |
| Conread position: | 13-409 |
| Cow position: | chr17:1457341-1457758 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 147 |
| Conread position: | 13-601 |
| Cow position: | chr17:24292680-24292064 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 274 |
| Conread position: | 14-442 |
| Cow position: | chr17:10270311-10270756 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 57-601 |
| Cow position: | chr17:5998494-5999058 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 382 |
| Conread position: | 100-368 |
| Cow position: | chr17:9745902-9745618 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 118-601 |
| Cow position: | chr17:26829976-26830473 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 387 |
| Conread position: | 160-599 |
| Cow position: | chr17:19790123-19789665 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 189-582 |
| Cow position: | chr17:23041200-23040812 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 211-600 |
| Cow position: | chr17:8222522-8222120 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 328 |
| Conread position: | 212-600 |
| Cow position: | chr17:14232768-14233174 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 218-601 |
| Cow position: | chr17:3236977-3236602 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 242-442 |
| Cow position: | chr17:20491467-20491265 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 105 |
Show alignments to all cow chromosomes.