Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-388 |
| Cow position: | chr2:80875633-80876041 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 283 |
| Conread position: | 1-464 |
| Cow position: | chr2:20856865-20857331 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 1-502 |
| Cow position: | chr2:45493715-45494204 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 335 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 5, 130 |
| Conread position: | 1-601 |
| Cow position: | chr2:43877450-43876824 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 3-345 |
| Cow position: | chr2:78645465-78645808 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 4-243 |
| Cow position: | chr2:35303178-35302925 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 4-303 |
| Cow position: | chr2:5917015-5916689 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 162 |
| Conread position: | 4-569 |
| Cow position: | chr2:10739122-10739715 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 4-583 |
| Cow position: | chr2:36882950-36883522 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 393 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 132, 24 |
| Conread position: | 4-594 |
| Cow position: | chr2:16324407-16323794 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 302 |
| Conread position: | 4-600 |
| Cow position: | chr2:25885823-25886457 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-600 |
| Cow position: | chr2:36983378-36982750 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 181 |
| Conread position: | 4-601 |
| Cow position: | chr2:778724-779324 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 4-601 |
| Cow position: | chr2:39424654-39424029 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 4-601 |
| Cow position: | chr2:55481493-55482108 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 4-601 |
| Cow position: | chr2:78765376-78764752 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 5-339 |
| Cow position: | chr2:35883744-35884108 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-560 |
| Cow position: | chr2:1426922-1427497 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 28 |
| Conread position: | 5-600 |
| Cow position: | chr2:3787225-3787826 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 6-600 |
| Cow position: | chr2:24928108-24927511 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 7-532 |
| Cow position: | chr2:62051218-62051769 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 7-599 |
| Cow position: | chr2:22133972-22134578 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 157 |
| Conread position: | 14-480 |
| Cow position: | chr2:54346818-54346337 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 167 |
| Conread position: | 15-248 |
| Cow position: | chr2:13006023-13005785 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 6, 55 |
| Conread position: | 15-601 |
| Cow position: | chr2:26080234-26079635 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 24-383 |
| Cow position: | chr2:33390130-33389765 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 89-598 |
| Cow position: | chr2:5299282-5298755 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 135-598 |
| Cow position: | chr2:45212098-45212585 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 310 |
| Conread position: | 145-600 |
| Cow position: | chr2:5284940-5285413 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 155 |
| Conread position: | 190-601 |
| Cow position: | chr2:30379532-30379107 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 194-421 |
| Cow position: | chr2:4931639-4931871 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 197-599 |
| Cow position: | chr2:8346914-8347329 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 211-496 |
| Cow position: | chr2:64447562-64447862 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 211-599 |
| Cow position: | chr2:33869231-33868844 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 196 |
| Conread position: | 213-601 |
| Cow position: | chr2:44932530-44932925 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 170 |
Show alignments to all cow chromosomes.