Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-311 |
| Cow position: | chr20:25988000-25987681 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 1-340 |
| Cow position: | chr20:10035491-10035842 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 193, 31 |
| Conread position: | 1-601 |
| Cow position: | chr20:12685327-12685965 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 318 |
| Conread position: | 1-601 |
| Cow position: | chr20:35159337-35159965 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 4-293 |
| Cow position: | chr20:10404941-10404632 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 220 |
| Conread position: | 4-385 |
| Cow position: | chr20:14741432-14741035 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 334 |
| Conread position: | 4-425 |
| Cow position: | chr20:30396886-30397328 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 4-426 |
| Cow position: | chr20:42923800-42923355 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 4-503 |
| Cow position: | chr20:2016567-2017081 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 255 |
| Conread position: | 4-524 |
| Cow position: | chr20:16515568-16515055 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 4-599 |
| Cow position: | chr20:28444102-28444730 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 497 |
| Conread position: | 4-600 |
| Cow position: | chr20:13766137-13765513 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 4-601 |
| Cow position: | chr20:6135746-6136374 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 5-242 |
| Cow position: | chr20:9996778-9996520 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-331 |
| Cow position: | chr20:5795018-5794666 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 5-339 |
| Cow position: | chr20:18490193-18489831 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 16, 292 |
| Conread position: | 5-599 |
| Cow position: | chr20:28294556-28293936 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 363 |
| Conread position: | 5-600 |
| Cow position: | chr20:28560641-28561268 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 10-601 |
| Cow position: | chr20:14867148-14867767 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 39-586 |
| Cow position: | chr20:23900565-23900006 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 48-332 |
| Cow position: | chr20:10062781-10063083 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 254 |
| Conread position: | 109-597 |
| Cow position: | chr20:10496117-10495610 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 188 |
| Conread position: | 134-601 |
| Cow position: | chr20:2179659-2180136 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 8 |
| Conread position: | 156-407 |
| Cow position: | chr20:13661455-13661703 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 211-599 |
| Cow position: | chr20:5270151-5270547 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 211-600 |
| Cow position: | chr20:22696036-22696430 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 160 |
Show alignments to all cow chromosomes.