Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-428 |
| Cow position: | chr21:4722015-4721580 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 1-440 |
| Cow position: | chr21:32203598-32203133 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 313 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 1-477 |
| Cow position: | chr21:20578031-20578525 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 1-498 |
| Cow position: | chr21:25814037-25814561 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 353 |
| Conread position: | 1-523 |
| Cow position: | chr21:29253834-29254386 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 518 |
| Conread position: | 1-598 |
| Cow position: | chr21:21918850-21918214 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 165 |
| Conread position: | 4-326 |
| Cow position: | chr21:27343043-27343391 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 4-341 |
| Cow position: | chr21:45790464-45790105 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 4-369 |
| Cow position: | chr21:6623169-6622790 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 4-449 |
| Cow position: | chr21:26757368-26757845 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-529 |
| Cow position: | chr21:22944166-22943618 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 4-572 |
| Cow position: | chr21:39428757-39428157 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 367 |
| Conread position: | 4-599 |
| Cow position: | chr21:27620145-27620768 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 293 |
| Conread position: | 4-600 |
| Cow position: | chr21:1195893-1195266 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 4-600 |
| Cow position: | chr21:27125363-27125997 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 4-600 |
| Cow position: | chr21:33256911-33256283 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 363 |
| Conread position: | 4-601 |
| Cow position: | chr21:6966117-6966745 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-601 |
| Cow position: | chr21:13300184-13299567 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 267 |
| Conread position: | 4-601 |
| Cow position: | chr21:21170970-21171578 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 260 |
| Conread position: | 5-358 |
| Cow position: | chr21:4266180-4266547 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 5-386 |
| Cow position: | chr21:4733177-4733582 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 5-595 |
| Cow position: | chr21:33998163-33998781 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 350 |
| Conread position: | 6-601 |
| Cow position: | chr21:4863994-4864600 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 401 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 7-599 |
| Cow position: | chr21:24949463-24948836 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 13-284 |
| Cow position: | chr21:37323452-37323750 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 13-600 |
| Cow position: | chr21:4079387-4078776 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 20-386 |
| Cow position: | chr21:4097912-4097549 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 20-540 |
| Cow position: | chr21:6864219-6864759 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 26-577 |
| Cow position: | chr21:21941226-21941793 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 47-402 |
| Cow position: | chr21:33357957-33358320 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 48-601 |
| Cow position: | chr21:1284950-1285524 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 54-587 |
| Cow position: | chr21:404297-404846 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 346 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 211-504 |
| Cow position: | chr21:37354848-37355146 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 211-598 |
| Cow position: | chr21:26030-26403 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 220 |
| Conread position: | 214-601 |
| Cow position: | chr21:5594857-5594452 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 211 |
| Conread position: | 223-343 |
| Cow position: | chr21:20741693-20741574 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.