Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-463 |
| Cow position: | chr22:14155772-14156252 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 336 |
| Conread position: | 4-243 |
| Cow position: | chr22:27320832-27320584 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 4-345 |
| Cow position: | chr22:3254441-3254805 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 4-510 |
| Cow position: | chr22:42500184-42500717 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 4-523 |
| Cow position: | chr22:39473436-39473986 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-531 |
| Cow position: | chr22:46568907-46569466 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 522 |
| Conread position: | 4-540 |
| Cow position: | chr22:51694-51135 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 4-582 |
| Cow position: | chr22:41170076-41169473 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 4-583 |
| Cow position: | chr22:25942431-25941829 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 167 |
| Conread position: | 4-595 |
| Cow position: | chr22:46611840-46612428 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 4-600 |
| Cow position: | chr22:19600620-19601245 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 494 |
| Conread position: | 4-601 |
| Cow position: | chr22:5015269-5014643 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 531 |
| Conread position: | 4-601 |
| Cow position: | chr22:12869274-12869902 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 549 |
| Conread position: | 4-601 |
| Cow position: | chr22:36357239-36356625 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 324 |
| Conread position: | 5-243 |
| Cow position: | chr22:6202285-6202540 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-307 |
| Cow position: | chr22:9371539-9371214 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 5-548 |
| Cow position: | chr22:13545543-13546076 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 364 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 5-572 |
| Cow position: | chr22:17994144-17994728 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 5-599 |
| Cow position: | chr22:13209563-13208953 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 5-601 |
| Cow position: | chr22:5930908-5931532 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 15-601 |
| Cow position: | chr22:13775670-13775059 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 186 |
| Conread position: | 20-600 |
| Cow position: | chr22:17325332-17325926 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 172 |
| Conread position: | 27-243 |
| Cow position: | chr22:30514164-30513933 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 171 |
| Conread position: | 51-589 |
| Cow position: | chr22:44494396-44493827 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 245 |
| Conread position: | 53-597 |
| Cow position: | chr22:22030349-22029779 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 58-548 |
| Cow position: | chr22:41034847-41034340 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 339 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 50, 249 |
| Conread position: | 61-601 |
| Cow position: | chr22:282869-283428 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 71-601 |
| Cow position: | chr22:48271897-48272452 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 244 |
| Conread position: | 87-578 |
| Cow position: | chr22:3271012-3271531 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 259 |
| Conread position: | 119-522 |
| Cow position: | chr22:42819788-42819380 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 147, 130 |
| Conread position: | 203-601 |
| Cow position: | chr22:5624801-5625209 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 237 |
| Conread position: | 211-559 |
| Cow position: | chr22:8595049-8595411 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 140 |
Show alignments to all cow chromosomes.