Cow genome map

Conread name: rtra04_c13r1.y1

Conread position: 1-243
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 159

Conread position: 1-309
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 27, 299

Conread position: 1-496
Cow position:
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-549
Cow position:
Alignm length: 580
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 340

Conread position: 1-578
Cow position:
Alignm length: 609
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 364

Conread position: 1-599
Cow position:
Alignm length: 633
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 9

Conread position: 1-599
Cow position:
Alignm length: 631
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 1-601
Cow position:
Alignm length: 648
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 2-346
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 4-319
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 4-324
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 4-538
Cow position:
Alignm length: 571
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 179

Conread position: 4-548
Cow position:
Alignm length: 570
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 428

Conread position: 4-589
Cow position:
Alignm length: 621
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 370

Conread position: 4-595
Cow position:
Alignm length: 616
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 201

Conread position: 4-599
Cow position:
Alignm length: 625
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 4-599
Cow position:
Alignm length: 639
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 4-600
Cow position:
Alignm length: 631
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 370

Conread position: 5-241
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 8

Conread position: 5-340
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 164

Conread position: 5-514
Cow position:
Alignm length: 534
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 246

Conread position: 13-601
Cow position:
Alignm length: 629
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 14-598
Cow position:
Alignm length: 614
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 139

Conread position: 14-599
Cow position:
Alignm length: 617
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 38

Conread position: 15-586
Cow position:
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 249

Conread position: 23-340
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 151

Conread position: 23-601
Cow position:
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 68

Conread position: 40-363
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 85

Conread position: 88-490
Cow position:
Alignm length: 420
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 89-508
Cow position:
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 172

Conread position: 211-434
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 113

Conread position: 218-506
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 81

Show alignments to all cow chromosomes.