Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-243 |
| Cow position: | chr4:39645667-39645409 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 4-312 |
| Cow position: | chr4:38180672-38180344 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 4-355 |
| Cow position: | chr4:23452100-23452477 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 313 |
| Conread position: | 4-413 |
| Cow position: | chr4:54189682-54189268 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 4-443 |
| Cow position: | chr4:8648989-8648517 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 367 |
| Conread position: | 4-499 |
| Cow position: | chr4:3971301-3970800 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 4-505 |
| Cow position: | chr4:67394139-67393610 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 496 |
| Conread position: | 4-582 |
| Cow position: | chr4:34176072-34176688 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 371 |
| Conread position: | 4-599 |
| Cow position: | chr4:3128727-3128106 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 473 |
| Conread position: | 4-599 |
| Cow position: | chr4:60651505-60650876 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 524 |
| Conread position: | 4-601 |
| Cow position: | chr4:6266302-6266930 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-601 |
| Cow position: | chr4:28835474-28834849 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 305 |
| Conread position: | 4-601 |
| Cow position: | chr4:44901170-44900560 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 4-601 |
| Cow position: | chr4:55273064-55272421 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 5-381 |
| Cow position: | chr4:42103350-42102956 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 5-599 |
| Cow position: | chr4:21972780-21973375 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 215 |
| Conread position: | 7-601 |
| Cow position: | chr4:5611091-5611710 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 333 |
| Conread position: | 20-243 |
| Cow position: | chr4:25971856-25971619 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 33-434 |
| Cow position: | chr4:30284632-30284234 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 62-243 |
| Cow position: | chr4:9796737-9796933 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 128-437 |
| Cow position: | chr4:20642890-20642577 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 151-595 |
| Cow position: | chr4:43835122-43834654 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 278 |
| Conread position: | 190-601 |
| Cow position: | chr4:161870-161450 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 198-594 |
| Cow position: | chr4:38901413-38901820 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 214 |
| Conread position: | 198-594 |
| Cow position: | chr4:38908185-38907778 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 214 |
| Conread position: | 205-416 |
| Cow position: | chr4:25878106-25877893 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 82 |
Show alignments to all cow chromosomes.