Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-315 |
| Cow position: | chr6:60332497-60332157 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-373 |
| Cow position: | chr6:1380305-1380698 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 150 |
| Conread position: | 1-508 |
| Cow position: | chr6:11354024-11354549 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 145 |
| Conread position: | 1-581 |
| Cow position: | chr6:16703589-16704185 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 200 |
| Conread position: | 1-599 |
| Cow position: | chr6:52189834-52190428 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 413 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 1-600 |
| Cow position: | chr6:40158362-40158979 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 4-309 |
| Cow position: | chr6:529738-530060 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 272 |
| Conread position: | 4-434 |
| Cow position: | chr6:1888287-1888740 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 166 |
| Conread position: | 4-441 |
| Cow position: | chr6:10650642-10651097 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 4-559 |
| Cow position: | chr6:34504370-34504954 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-560 |
| Cow position: | chr6:12629053-12628466 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 4-582 |
| Cow position: | chr6:58951973-58952580 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 4-600 |
| Cow position: | chr6:43790425-43791050 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 509 |
| Conread position: | 4-600 |
| Cow position: | chr6:55539120-55539747 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 5-313 |
| Cow position: | chr6:30316791-30317125 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 187 |
| Conread position: | 5-416 |
| Cow position: | chr6:366035-365604 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 5-593 |
| Cow position: | chr6:6165790-6165193 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 5-601 |
| Cow position: | chr6:43797761-43798379 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 23-463 |
| Cow position: | chr6:39359069-39359527 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 195 |
| Conread position: | 53-579 |
| Cow position: | chr6:18751107-18751636 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 337 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 58-601 |
| Cow position: | chr6:14264930-14264357 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 127-601 |
| Cow position: | chr6:64251669-64252158 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 158-578 |
| Cow position: | chr6:22930897-22931311 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 166-479 |
| Cow position: | chr6:64425469-64425142 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 162 |
| Conread position: | 210-580 |
| Cow position: | chr6:65905371-65905750 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 211-594 |
| Cow position: | chr6:224988-225377 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 144 |
| Conread position: | 214-548 |
| Cow position: | chr6:24624474-24624815 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.