Cow genome map
| Conread name: | rtra04_c13r1.y1 |
| Conread position: | 1-243 |
| Cow position: | chr7:14865517-14865258 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-243 |
| Cow position: | chr7:51406702-51406443 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 1-375 |
| Cow position: | chr7:24059748-24059353 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 1-569 |
| Cow position: | chr7:30306062-30305481 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 1-595 |
| Cow position: | chr7:52383966-52384584 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 4-304 |
| Cow position: | chr7:29303535-29303860 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 4-329 |
| Cow position: | chr7:12483446-12483094 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 4-331 |
| Cow position: | chr7:45953922-45953569 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-455 |
| Cow position: | chr7:32713373-32713838 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 157 |
| Conread position: | 4-589 |
| Cow position: | chr7:21850162-21850754 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 189 |
| Conread position: | 4-599 |
| Cow position: | chr7:19467254-19467885 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 4-599 |
| Cow position: | chr7:60741697-60742308 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 4-600 |
| Cow position: | chr7:3128547-3127919 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 363 |
| Conread position: | 4-600 |
| Cow position: | chr7:40317942-40317320 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 4-601 |
| Cow position: | chr7:99333-99949 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 4-601 |
| Cow position: | chr7:21317400-21316768 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 322 |
| Conread position: | 4-601 |
| Cow position: | chr7:42224551-42225182 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 309 |
| Conread position: | 5-548 |
| Cow position: | chr7:55688736-55689300 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 184 |
| Conread position: | 5-550 |
| Cow position: | chr7:54582696-54582121 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 163 |
| Conread position: | 6-599 |
| Cow position: | chr7:21240521-21241131 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 14-540 |
| Cow position: | chr7:60757960-60758516 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 23-558 |
| Cow position: | chr7:1600807-1601360 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 315 |
| Conread position: | 31-559 |
| Cow position: | chr7:39595555-39596098 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 35-601 |
| Cow position: | chr7:51193911-51193334 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 48-595 |
| Cow position: | chr7:5436912-5437482 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 52-425 |
| Cow position: | chr7:68087135-68086739 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 284 |
| Conread position: | 54-418 |
| Cow position: | chr7:53360099-53360469 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 54-599 |
| Cow position: | chr7:65326564-65327115 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 57-409 |
| Cow position: | chr7:51674927-51674543 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 58-601 |
| Cow position: | chr7:536654-537228 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 84-549 |
| Cow position: | chr7:19182170-19181697 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 374 |
| Conread position: | 86-594 |
| Cow position: | chr7:18934540-18935054 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 106-570 |
| Cow position: | chr7:48860574-48861048 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 128 |
| Conread position: | 163-558 |
| Cow position: | chr7:66234769-66235174 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 197-601 |
| Cow position: | chr7:19168443-19168862 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 211-599 |
| Cow position: | chr7:59659477-59659079 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 244-601 |
| Cow position: | chr7:1722163-1722534 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 70 |
Show alignments to all cow chromosomes.