Cow genome map

Conread name: rtra04_c13r1.y1

Conread position: 1-312
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 20, 59

Conread position: 1-489
Cow position:
Alignm length: 531
Alignm identity: 355
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 161

Conread position: 1-502
Cow position:
Alignm length: 529
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 388

Conread position: 1-515
Cow position:
Alignm length: 542
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 358

Conread position: 1-515
Cow position:
Alignm length: 542
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 358

Conread position: 1-600
Cow position:
Alignm length: 632
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 336

Conread position: 4-322
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 131

Conread position: 4-331
Cow position:
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 169

Conread position: 4-358
Cow position:
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 4-386
Cow position:
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 4-386
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 58

Conread position: 4-412
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 314

Conread position: 4-423
Cow position:
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 4-506
Cow position:
Alignm length: 528
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 49

Conread position: 4-536
Cow position:
Alignm length: 549
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 4-597
Cow position:
Alignm length: 632
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 301

Conread position: 4-599
Cow position:
Alignm length: 629
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 567

Conread position: 4-600
Cow position:
Alignm length: 628
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 343

Conread position: 4-600
Cow position:
Alignm length: 631
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 4-601
Cow position:
Alignm length: 635
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 260

Conread position: 4-601
Cow position:
Alignm length: 625
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 260

Conread position: 4-601
Cow position:
Alignm length: 631
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 5-301
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 21

Conread position: 5-369
Cow position:
Alignm length: 384
Alignm identity: 256
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 55

Conread position: 5-523
Cow position:
Alignm length: 537
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 49

Conread position: 5-599
Cow position:
Alignm length: 629
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 403

Conread position: 5-600
Cow position:
Alignm length: 629
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 497

Conread position: 5-600
Cow position:
Alignm length: 627
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 591

Conread position: 5-600
Cow position:
Alignm length: 629
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 137

Conread position: 8-308
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 304

Conread position: 13-308
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 13-545
Cow position:
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 140

Conread position: 13-599
Cow position:
Alignm length: 618
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 293

Conread position: 14-599
Cow position:
Alignm length: 618
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 328

Conread position: 20-601
Cow position:
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 50-576
Cow position:
Alignm length: 555
Alignm identity: 341
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 100

Conread position: 53-601
Cow position:
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 57-590
Cow position:
Alignm length: 550
Alignm identity: 361
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 117

Conread position: 67-339
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 282

Conread position: 76-296
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 76-383
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 90-243
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 106-599
Cow position:
Alignm length: 525
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 408

Conread position: 117-481
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 317

Conread position: 134-601
Cow position:
Alignm length: 487
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 182

Conread position: 137-586
Cow position:
Alignm length: 477
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 146-591
Cow position:
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 156

Conread position: 183-601
Cow position:
Alignm length: 433
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 156

Conread position: 209-522
Cow position:
Alignm length: 317
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 235, 36

Conread position: 210-599
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 180

Conread position: 211-601
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 379

Conread position: 211-601
Cow position:
Alignm length: 405
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 211-601
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 94

Conread position: 212-516
Cow position:
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 52

Show alignments to all cow chromosomes.