Cow genome map
| Conread name: | rtra04_d19r1.y1 |
| Conread position: | 1-245 |
| Cow position: | chr14:25794407-25794162 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25783363-25783614 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25783447-25783698 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 1-252 |
| Cow position: | chr14:25783615-25783866 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25783699-25783950 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25783783-25784034 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25783867-25784118 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 122 |
| Conread position: | 1-252 |
| Cow position: | chr14:25784035-25784286 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25784119-25784370 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25784203-25784454 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25784287-25784538 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25784371-25784622 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25794659-25794408 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25794911-25794660 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:25795415-25795164 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 193, 199 |
| Conread position: | 2-246 |
| Cow position: | chr14:680915-681159 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 106 |
| Conread position: | 3-246 |
| Cow position: | chr14:25860381-25860624 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 128, 110 |
| Conread position: | 3-246 |
| Cow position: | chr14:25877096-25877339 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 220, 215 |
| Conread position: | 3-246 |
| Cow position: | chr14:25877432-25877675 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 110 |
| Conread position: | 3-252 |
| Cow position: | chr14:25860213-25860462 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-246 |
| Cow position: | chr14:3080151-3079910 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 103, 118 |
| Conread position: | 5-252 |
| Cow position: | chr14:25836406-25836653 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 5-252 |
| Cow position: | chr14:25859375-25859622 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-252 |
| Cow position: | chr14:25876594-25876841 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 211, 204 |
| Conread position: | 5-252 |
| Cow position: | chr14:25876846-25877093 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 119, 107 |
| Conread position: | 6-252 |
| Cow position: | chr14:25859544-25859790 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 7-252 |
| Cow position: | chr14:25860049-25860294 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 216, 211 |
| Conread position: | 7-252 |
| Cow position: | chr14:25876680-25876925 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 118 |
| Conread position: | 8-252 |
| Cow position: | chr14:25836241-25836485 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 115, 103 |
| Conread position: | 16-246 |
| Cow position: | chr14:3100635-3100405 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-237 |
| Cow position: | chr14:25837008-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 101 |
| Conread position: | 37-252 |
| Cow position: | chr14:25795463-25795248 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 167, 158 |
| Conread position: | 44-248 |
| Cow position: | chr14:3101441-3101238 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 67, 79 |
| Conread position: | 46-252 |
| Cow position: | chr14:3155878-3156084 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 72, 58 |
| Conread position: | 47-246 |
| Cow position: | chr14:25877560-25877759 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 117 |
| Conread position: | 47-252 |
| Cow position: | chr14:3127873-3127668 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-252 |
| Cow position: | chr14:25836868-25837073 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-252 |
| Cow position: | chr14:25859681-25859874 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 63-246 |
| Cow position: | chr14:3155406-3155589 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 54 |
Show alignments to all cow chromosomes.