Cow genome map


           Conread name:
           rtra04_d19r1.y1
        

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               107, 118
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               131, 127
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 42
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 59
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               126, 131
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               122, 111
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               134, 116
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 206
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               103, 107
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-235
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               101, 111
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               101, 113
               

               Conread position:
               8-252
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               17-252
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-252
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               81, 94
               

               Conread position:
               26-252
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-252
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               46-252
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 66
               

               Conread position:
               47-252
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-252
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-252
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-252
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.