Cow genome map
| Conread name: | rtra04_d19r1.y1 |
| Conread position: | 1-246 |
| Cow position: | chr23:24535775-24535530 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 206, 187 |
| Conread position: | 1-246 |
| Cow position: | chr23:24535859-24535614 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-246 |
| Cow position: | chr23:24639486-24639731 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr23:24522466-24522215 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 211, 194 |
| Conread position: | 1-252 |
| Cow position: | chr23:24522715-24522467 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 121, 127 |
| Conread position: | 1-252 |
| Cow position: | chr23:24547060-24546809 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 110 |
| Conread position: | 1-252 |
| Cow position: | chr23:24560536-24560285 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr23:24560788-24560537 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr23:24626326-24626577 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr23:24626410-24626661 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 198, 194 |
| Conread position: | 1-252 |
| Cow position: | chr23:24639738-24639989 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-252 |
| Cow position: | chr23:25626552-25626800 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-241 |
| Cow position: | chr23:24560367-24560128 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 121, 109 |
| Conread position: | 2-252 |
| Cow position: | chr23:24626495-24626743 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 103 |
| Conread position: | 2-252 |
| Cow position: | chr23:25626133-25626383 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-252 |
| Cow position: | chr23:25660170-25660420 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 3-252 |
| Cow position: | chr23:25660423-25660672 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-252 |
| Cow position: | chr23:24547308-24547061 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 194, 190 |
| Conread position: | 5-252 |
| Cow position: | chr23:24560868-24560621 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-252 |
| Cow position: | chr23:24654055-24654302 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-252 |
| Cow position: | chr23:25698634-25698387 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 5-252 |
| Cow position: | chr23:25724105-25723858 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 118 |
| Conread position: | 6-252 |
| Cow position: | chr23:24535938-24535692 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-243 |
| Cow position: | chr23:25698463-25698228 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 157 |
| Conread position: | 8-246 |
| Cow position: | chr23:25626055-25626293 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 188, 194 |
| Conread position: | 28-252 |
| Cow position: | chr23:24560425-24560201 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-252 |
| Cow position: | chr23:24626274-24626493 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 43-241 |
| Cow position: | chr23:25626843-25627041 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 119 |
| Conread position: | 46-252 |
| Cow position: | chr23:24639279-24639485 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 102, 110 |
| Conread position: | 59-252 |
| Cow position: | chr23:25660395-25660588 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 62-252 |
| Cow position: | chr23:25660146-25660336 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-248 |
| Cow position: | chr23:24547329-24547149 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 87-252 |
| Cow position: | chr23:25724107-25723942 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 124 |
Show alignments to all cow chromosomes.