Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 28-478 |
| Cow position: | chr10:22980081-22979631 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 53-475 |
| Cow position: | chr10:4402269-4402720 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 7, 161 |
| Conread position: | 59-478 |
| Cow position: | chr10:18085834-18086270 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 59-488 |
| Cow position: | chr10:54159525-54159966 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 14, 104 |
| Conread position: | 72-475 |
| Cow position: | chr10:4558319-4557908 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 135 |
| Conread position: | 72-486 |
| Cow position: | chr10:61506564-61507008 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 78-474 |
| Cow position: | chr10:60428524-60428102 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 41, 170 |
| Conread position: | 79-471 |
| Cow position: | chr10:49182633-49183038 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 81-468 |
| Cow position: | chr10:59519543-59519943 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 81-471 |
| Cow position: | chr10:53105159-53104750 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 81-474 |
| Cow position: | chr10:25645983-25645564 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 81-474 |
| Cow position: | chr10:30439035-30438627 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 81-474 |
| Cow position: | chr10:60485711-60486119 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 81-478 |
| Cow position: | chr10:4019261-4019686 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 83-463 |
| Cow position: | chr10:35443686-35444062 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 163 |
| Conread position: | 83-482 |
| Cow position: | chr10:23690212-23690627 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 83-486 |
| Cow position: | chr10:39248871-39248463 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 87-484 |
| Cow position: | chr10:55641083-55641501 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 98-480 |
| Cow position: | chr10:21695815-21695414 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 117-424 |
| Cow position: | chr10:16061878-16062204 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 117-487 |
| Cow position: | chr10:45507931-45507554 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 131-474 |
| Cow position: | chr10:79357-78993 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 191, 113 |
| Conread position: | 140-482 |
| Cow position: | chr10:27977808-27977467 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 142, 108 |
| Conread position: | 155-478 |
| Cow position: | chr10:49391367-49391032 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 168, 90 |
| Conread position: | 167-487 |
| Cow position: | chr10:27313721-27313384 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 78 |
| Conread position: | 172-471 |
| Cow position: | chr10:8243572-8243254 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 36 |
| Conread position: | 174-474 |
| Cow position: | chr10:22985612-22985304 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 189-471 |
| Cow position: | chr10:7652870-7653171 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 197-475 |
| Cow position: | chr10:28999366-28999658 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 213-482 |
| Cow position: | chr10:55338105-55337829 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 248-478 |
| Cow position: | chr10:25544944-25544691 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.