Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 52-471 |
| Cow position: | chr13:47570640-47571084 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 312 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 8, 81 |
| Conread position: | 63-495 |
| Cow position: | chr13:28549851-28550286 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 72-464 |
| Cow position: | chr13:37803114-37802723 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 178 |
| Conread position: | 72-465 |
| Cow position: | chr13:21855813-21856221 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 90 |
| Conread position: | 72-470 |
| Cow position: | chr13:26024810-26025228 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 51, 178 |
| Conread position: | 75-474 |
| Cow position: | chr13:37636531-37636107 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 175 |
| Conread position: | 82-474 |
| Cow position: | chr13:46922498-46922079 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 83-478 |
| Cow position: | chr13:12707987-12708401 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 344 |
| Conread position: | 84-478 |
| Cow position: | chr13:9298081-9298494 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 87-484 |
| Cow position: | chr13:41255329-41254902 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 91-471 |
| Cow position: | chr13:19412343-19412725 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 97-484 |
| Cow position: | chr13:19730844-19730435 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 98-480 |
| Cow position: | chr13:9559570-9559176 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 115-474 |
| Cow position: | chr13:45132313-45131948 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 206, 53 |
| Conread position: | 117-474 |
| Cow position: | chr13:5656864-5656487 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 167-481 |
| Cow position: | chr13:3775946-3776278 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 172-478 |
| Cow position: | chr13:12912455-12912125 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 175-473 |
| Cow position: | chr13:52017140-52016817 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 175-484 |
| Cow position: | chr13:12612046-12612362 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 199-465 |
| Cow position: | chr13:46641452-46641742 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 203-474 |
| Cow position: | chr13:92115-91818 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 203-489 |
| Cow position: | chr13:52278450-52278148 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 212-484 |
| Cow position: | chr13:41901907-41901608 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 248-478 |
| Cow position: | chr13:2789623-2789872 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 251-486 |
| Cow position: | chr13:21277483-21277230 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.