Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 53-474 |
| Cow position: | chr16:18513992-18514436 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 72-465 |
| Cow position: | chr16:50517441-50517842 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 72-468 |
| Cow position: | chr16:42639029-42638621 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 72-474 |
| Cow position: | chr16:46616735-46617146 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 74-474 |
| Cow position: | chr16:19067495-19067929 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 78-456 |
| Cow position: | chr16:48338686-48339064 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 81-471 |
| Cow position: | chr16:31389359-31388954 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 37, 172 |
| Conread position: | 81-474 |
| Cow position: | chr16:39760524-39760940 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 81-487 |
| Cow position: | chr16:18950993-18950571 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 82-474 |
| Cow position: | chr16:23317119-23316719 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 82-486 |
| Cow position: | chr16:43772257-43772677 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 216 |
| Conread position: | 84-465 |
| Cow position: | chr16:46660681-46661080 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 88-484 |
| Cow position: | chr16:9875415-9874999 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 104, 47 |
| Conread position: | 94-471 |
| Cow position: | chr16:23930962-23930569 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 101-482 |
| Cow position: | chr16:15421327-15421726 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 117-471 |
| Cow position: | chr16:19286443-19286811 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 158, 43 |
| Conread position: | 176-472 |
| Cow position: | chr16:14619155-14618835 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 176-474 |
| Cow position: | chr16:13888198-13888516 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 194-482 |
| Cow position: | chr16:14067238-14066938 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 195-405 |
| Cow position: | chr16:31138201-31137980 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 199-478 |
| Cow position: | chr16:42244307-42244617 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 228-471 |
| Cow position: | chr16:39026601-39026338 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 237-484 |
| Cow position: | chr16:454981-454723 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 253-470 |
| Cow position: | chr16:16949493-16949723 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.