Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 32-461 |
| Cow position: | chr17:18554125-18553682 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 52-474 |
| Cow position: | chr17:32440503-32440953 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 301 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 58-429 |
| Cow position: | chr17:18551681-18551298 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 59-465 |
| Cow position: | chr17:29833350-29832923 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 81-464 |
| Cow position: | chr17:28381777-28381369 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 81-471 |
| Cow position: | chr17:32274448-32274834 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 142, 51 |
| Conread position: | 83-482 |
| Cow position: | chr17:12975496-12975105 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 134, 71 |
| Conread position: | 84-482 |
| Cow position: | chr17:171129-170736 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 85-478 |
| Cow position: | chr17:32531271-32530867 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 102-471 |
| Cow position: | chr17:18627772-18628161 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 107-471 |
| Cow position: | chr17:28467335-28467719 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 123-478 |
| Cow position: | chr17:35255027-35254650 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 125, 111 |
| Conread position: | 162-484 |
| Cow position: | chr17:27836711-27837046 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 87 |
| Conread position: | 167-474 |
| Cow position: | chr17:33880268-33879946 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 167-475 |
| Cow position: | chr17:31744049-31743725 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 167-478 |
| Cow position: | chr17:9903545-9903874 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 177-475 |
| Cow position: | chr17:39683273-39682953 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 187-474 |
| Cow position: | chr17:27782304-27782594 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 231 |
| Conread position: | 194-484 |
| Cow position: | chr17:20135162-20134863 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 112, 58 |
| Conread position: | 212-474 |
| Cow position: | chr17:20700498-20700215 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 70, 36 |
Show alignments to all cow chromosomes.