Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 59-475 |
| Cow position: | chr18:7085322-7085761 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 187 |
| Conread position: | 65-474 |
| Cow position: | chr18:44519461-44519895 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 181 |
| Conread position: | 70-287 |
| Cow position: | chr18:1658795-1658577 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 149, 79 |
| Conread position: | 78-475 |
| Cow position: | chr18:41391298-41391689 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 83-456 |
| Cow position: | chr18:28189374-28188984 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 85-468 |
| Cow position: | chr18:21245177-21245576 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 101-475 |
| Cow position: | chr18:456370-456767 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 117-475 |
| Cow position: | chr18:48534338-48534725 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 130-474 |
| Cow position: | chr18:52803355-52803717 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 134-474 |
| Cow position: | chr18:13159931-13160283 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 145, 102 |
| Conread position: | 145-474 |
| Cow position: | chr18:9855105-9854753 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 149 |
| Conread position: | 167-470 |
| Cow position: | chr18:47047938-47047608 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 167-478 |
| Cow position: | chr18:32539099-32538779 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 167-480 |
| Cow position: | chr18:21373586-21373899 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 172-474 |
| Cow position: | chr18:35876392-35876071 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 175-471 |
| Cow position: | chr18:49156459-49156143 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 194-478 |
| Cow position: | chr18:51251775-51252087 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 196-474 |
| Cow position: | chr18:53280160-53279872 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 206-482 |
| Cow position: | chr18:13847895-13847605 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 248-471 |
| Cow position: | chr18:14837412-14837656 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 248-474 |
| Cow position: | chr18:32046594-32046833 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 107 |
Show alignments to all cow chromosomes.