Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 53-480 |
| Cow position: | chr2:11828456-11828023 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 71-482 |
| Cow position: | chr2:60898786-60898373 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 72-474 |
| Cow position: | chr2:56525304-56524887 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 138, 56 |
| Conread position: | 72-484 |
| Cow position: | chr2:42205923-42205493 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 75-474 |
| Cow position: | chr2:16369522-16369938 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 285 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 81-471 |
| Cow position: | chr2:49190384-49190799 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 172 |
| Conread position: | 81-478 |
| Cow position: | chr2:73777840-73777441 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 134, 35 |
| Conread position: | 82-474 |
| Cow position: | chr2:23177775-23178188 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 166 |
| Conread position: | 83-474 |
| Cow position: | chr2:19135213-19135619 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 88-416 |
| Cow position: | chr2:33545539-33545863 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 217, 30 |
| Conread position: | 103-474 |
| Cow position: | chr2:17820450-17820063 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 115-448 |
| Cow position: | chr2:45996198-45996546 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 53, 91 |
| Conread position: | 117-429 |
| Cow position: | chr2:54492992-54492671 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 120-473 |
| Cow position: | chr2:76180886-76180536 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 131 |
| Conread position: | 124-474 |
| Cow position: | chr2:49022041-49022410 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 167-482 |
| Cow position: | chr2:18071307-18071636 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 167-484 |
| Cow position: | chr2:1315190-1314864 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 115, 172 |
| Conread position: | 175-475 |
| Cow position: | chr2:82186536-82186229 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 175-484 |
| Cow position: | chr2:70913010-70913324 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 170, 30 |
| Conread position: | 194-474 |
| Cow position: | chr2:8568995-8568699 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 199-471 |
| Cow position: | chr2:545590-545299 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 213-474 |
| Cow position: | chr2:82874091-82873812 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 230-471 |
| Cow position: | chr2:13049096-13049344 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 230-481 |
| Cow position: | chr2:14738514-14738781 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 240-471 |
| Cow position: | chr2:2045515-2045763 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 180 |
| Conread position: | 247-475 |
| Cow position: | chr2:58794521-58794272 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 248-429 |
| Cow position: | chr2:51459717-51459902 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 253-475 |
| Cow position: | chr2:61813259-61813502 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.