Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 67-471 |
| Cow position: | chr21:4178177-4177745 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 68-464 |
| Cow position: | chr21:34394976-34394573 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 277 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 72-465 |
| Cow position: | chr21:36620612-36620206 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 72-478 |
| Cow position: | chr21:21126421-21126835 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 56 |
| Conread position: | 72-483 |
| Cow position: | chr21:13532356-13531915 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 78-478 |
| Cow position: | chr21:46598987-46598566 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 81-399 |
| Cow position: | chr21:22491491-22491814 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 81-474 |
| Cow position: | chr21:28173708-28173298 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 81-475 |
| Cow position: | chr21:46386345-46385938 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 82-478 |
| Cow position: | chr21:34548124-34547713 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 83-474 |
| Cow position: | chr21:24980882-24981272 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 88-471 |
| Cow position: | chr21:2206796-2206390 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 88-474 |
| Cow position: | chr21:16118212-16117801 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 101-416 |
| Cow position: | chr21:23028052-23028361 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 221, 16 |
| Conread position: | 103-478 |
| Cow position: | chr21:4860589-4860197 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 116-487 |
| Cow position: | chr21:16481018-16480632 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 140-474 |
| Cow position: | chr21:170776-171132 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 106 |
| Conread position: | 183-464 |
| Cow position: | chr21:17553020-17553314 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 186-475 |
| Cow position: | chr21:35779546-35779236 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 189-478 |
| Cow position: | chr21:30327783-30328083 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 29 |
| Conread position: | 194-486 |
| Cow position: | chr21:3794005-3793709 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 247-480 |
| Cow position: | chr21:39764015-39763763 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.