Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 43-471 |
| Cow position: | chr25:41409665-41410105 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 72-474 |
| Cow position: | chr25:19015503-19015112 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 73-474 |
| Cow position: | chr25:27424286-27423848 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 162 |
| Conread position: | 73-476 |
| Cow position: | chr25:21303113-21303530 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 73-480 |
| Cow position: | chr25:22713167-22713581 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 81-429 |
| Cow position: | chr25:352147-352513 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 81-475 |
| Cow position: | chr25:5796709-5797126 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 167 |
| Conread position: | 81-478 |
| Cow position: | chr25:17629851-17630253 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 81-478 |
| Cow position: | chr25:18549377-18548974 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 81-478 |
| Cow position: | chr25:23845361-23844946 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 82-471 |
| Cow position: | chr25:41306938-41306538 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 82-478 |
| Cow position: | chr25:2195950-2196354 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 83-478 |
| Cow position: | chr25:30666269-30665865 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 137, 157 |
| Conread position: | 85-453 |
| Cow position: | chr25:2702433-2702064 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 85-472 |
| Cow position: | chr25:26539583-26539973 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 85-474 |
| Cow position: | chr25:621741-621339 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 120-474 |
| Cow position: | chr25:21384110-21383754 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 156, 75 |
| Conread position: | 136-471 |
| Cow position: | chr25:20234787-20234433 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 140-494 |
| Cow position: | chr25:38382406-38382779 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 172-474 |
| Cow position: | chr25:10356879-10356552 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 175-412 |
| Cow position: | chr25:9943867-9943624 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 201-474 |
| Cow position: | chr25:16572779-16573049 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 202-478 |
| Cow position: | chr25:18747628-18747930 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 204-477 |
| Cow position: | chr25:18742969-18742674 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 218-478 |
| Cow position: | chr25:36895186-36894925 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 258-482 |
| Cow position: | chr25:13973613-13973857 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 233 |
Show alignments to all cow chromosomes.