Cow genome map


           Conread name:
           rtra04_k7r1.y1
        

               Conread position:
               75-471
               

               Cow position:
               chr29:24083608-24083190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               82-471
               

               Cow position:
               chr29:13045973-13046381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               82-474
               

               Cow position:
               chr29:5029170-5029577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               86-465
               

               Cow position:
               chr29:40464557-40464952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               87-470
               

               Cow position:
               chr29:43625926-43625523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 329
               

               Conread position:
               97-465
               

               Cow position:
               chr29:2564198-2564583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               117-417
               

               Cow position:
               chr29:21520645-21520345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               118, 64
               

               Conread position:
               126-477
               

               Cow position:
               chr29:33091515-33091879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               181, 101
               

               Conread position:
               155-478
               

               Cow position:
               chr29:30516216-30515873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 95
               

               Conread position:
               175-484
               

               Cow position:
               chr29:31345950-31345624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               200-478
               

               Cow position:
               chr29:29001107-29000805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               248-470
               

               Cow position:
               chr29:25348469-25348702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               96, 6
               
Show alignments to all cow chromosomes.