Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 53-474 |
| Cow position: | chr3:10932723-10933170 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 60-468 |
| Cow position: | chr3:69590680-69590257 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 67-420 |
| Cow position: | chr3:63274451-63274804 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 72-470 |
| Cow position: | chr3:43045514-43045926 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 148 |
| Conread position: | 75-475 |
| Cow position: | chr3:13451214-13451607 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 175, 50 |
| Conread position: | 78-482 |
| Cow position: | chr3:7984481-7984057 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 80-484 |
| Cow position: | chr3:69496306-69495882 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 81-465 |
| Cow position: | chr3:19765439-19765807 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 81-466 |
| Cow position: | chr3:70519674-70519273 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 172 |
| Conread position: | 81-468 |
| Cow position: | chr3:41655154-41655571 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 81-474 |
| Cow position: | chr3:66859241-66859654 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 203, 171 |
| Conread position: | 81-482 |
| Cow position: | chr3:56203276-56202860 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 81-483 |
| Cow position: | chr3:15998953-15999361 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 232 |
| Conread position: | 81-496 |
| Cow position: | chr3:24657810-24657378 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 82-475 |
| Cow position: | chr3:80453119-80452714 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 83-471 |
| Cow position: | chr3:20452945-20453331 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 83-473 |
| Cow position: | chr3:55985143-55985545 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 83-482 |
| Cow position: | chr3:53568427-53568840 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 84-485 |
| Cow position: | chr3:70353944-70353526 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 97-471 |
| Cow position: | chr3:23921165-23920776 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 149 |
| Conread position: | 107-474 |
| Cow position: | chr3:76157220-76157608 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 118-474 |
| Cow position: | chr3:47686735-47686375 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 194, 116 |
| Conread position: | 123-484 |
| Cow position: | chr3:14520954-14521335 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 128-474 |
| Cow position: | chr3:41582979-41583322 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 138-478 |
| Cow position: | chr3:44393573-44393943 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 144-475 |
| Cow position: | chr3:45301049-45301399 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 10, 109 |
| Conread position: | 175-417 |
| Cow position: | chr3:84333-84079 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 56 |
| Conread position: | 175-467 |
| Cow position: | chr3:34567-34862 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 194-471 |
| Cow position: | chr3:61553761-61553473 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 195-470 |
| Cow position: | chr3:68357801-68357504 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 202-474 |
| Cow position: | chr3:57876922-57877199 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 221-471 |
| Cow position: | chr3:39225513-39225250 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 232-461 |
| Cow position: | chr3:8190949-8191196 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 16 |
Show alignments to all cow chromosomes.