Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 53-474 |
| Cow position: | chr4:20615233-20614798 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 59-482 |
| Cow position: | chr4:22877980-22877541 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 104 |
| Conread position: | 63-471 |
| Cow position: | chr4:48753495-48753907 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 53, 185 |
| Conread position: | 64-471 |
| Cow position: | chr4:49852380-49851956 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 52, 65 |
| Conread position: | 72-471 |
| Cow position: | chr4:32001232-32001655 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 74-474 |
| Cow position: | chr4:37947430-37946997 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 78-471 |
| Cow position: | chr4:14384236-14383833 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 81-424 |
| Cow position: | chr4:48418128-48417770 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 35, 90 |
| Conread position: | 81-478 |
| Cow position: | chr4:49611554-49611953 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 81-478 |
| Cow position: | chr4:53665174-53665587 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 82-478 |
| Cow position: | chr4:27543343-27542926 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 137, 48 |
| Conread position: | 83-462 |
| Cow position: | chr4:33196710-33196313 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 113 |
| Conread position: | 83-477 |
| Cow position: | chr4:6156037-6156445 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 91-456 |
| Cow position: | chr4:51947717-51948095 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 92-478 |
| Cow position: | chr4:52717664-52717277 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 94-457 |
| Cow position: | chr4:993589-993213 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 107-482 |
| Cow position: | chr4:3720622-3720240 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 117-479 |
| Cow position: | chr4:54127222-54127586 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 118-454 |
| Cow position: | chr4:53132352-53132021 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 158-474 |
| Cow position: | chr4:36828761-36829079 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 161-483 |
| Cow position: | chr4:6628022-6628361 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 167-474 |
| Cow position: | chr4:45994216-45994541 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 182-486 |
| Cow position: | chr4:66460446-66460123 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 186-471 |
| Cow position: | chr4:20192873-20193166 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 189-474 |
| Cow position: | chr4:46359454-46359758 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 199-471 |
| Cow position: | chr4:5238565-5238857 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 232-474 |
| Cow position: | chr4:28778181-28778435 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 15 |
Show alignments to all cow chromosomes.