Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 34-472 |
| Cow position: | chr5:21592643-21593095 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 186 |
| Conread position: | 53-474 |
| Cow position: | chr5:69693212-69693630 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 55-482 |
| Cow position: | chr5:14906331-14905879 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 59-471 |
| Cow position: | chr5:28699455-28699017 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 66-471 |
| Cow position: | chr5:1926702-1926290 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 72-471 |
| Cow position: | chr5:62341402-62341827 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 81-474 |
| Cow position: | chr5:15795536-15795944 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 82-475 |
| Cow position: | chr5:28528807-28528435 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 83-471 |
| Cow position: | chr5:74462522-74462115 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 83-473 |
| Cow position: | chr5:40050438-40050028 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 83-482 |
| Cow position: | chr5:33175572-33175976 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 164 |
| Conread position: | 84-474 |
| Cow position: | chr5:44359410-44359821 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 90-475 |
| Cow position: | chr5:45602248-45601828 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 90-478 |
| Cow position: | chr5:28930901-28931301 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 142-471 |
| Cow position: | chr5:5527020-5526663 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 162-494 |
| Cow position: | chr5:64588353-64588683 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 86 |
| Conread position: | 167-471 |
| Cow position: | chr5:62268176-62268506 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 167-475 |
| Cow position: | chr5:48247838-48248165 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 171-486 |
| Cow position: | chr5:41201468-41201147 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 172-482 |
| Cow position: | chr5:27534743-27534429 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 175-480 |
| Cow position: | chr5:35444465-35444791 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 201-482 |
| Cow position: | chr5:22890468-22890165 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 202-471 |
| Cow position: | chr5:15624201-15624486 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 203-484 |
| Cow position: | chr5:63836299-63836589 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 240-480 |
| Cow position: | chr5:35320333-35320071 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.