Cow genome map
| Conread name: | rtra04_k7r1.y1 |
| Conread position: | 53-475 |
| Cow position: | chr8:52214211-52213775 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 53-484 |
| Cow position: | chr8:31260809-31261262 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 58-464 |
| Cow position: | chr8:11667788-11667378 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 64-484 |
| Cow position: | chr8:44463376-44462936 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 67-475 |
| Cow position: | chr8:53989677-53989280 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 215, 6 |
| Conread position: | 70-482 |
| Cow position: | chr8:6762546-6762108 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 228 |
| Conread position: | 72-465 |
| Cow position: | chr8:13214589-13214172 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 72-474 |
| Cow position: | chr8:52619827-52619406 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 72-478 |
| Cow position: | chr8:19783249-19783661 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 81-412 |
| Cow position: | chr8:31835681-31836012 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 197, 29 |
| Conread position: | 81-429 |
| Cow position: | chr8:47213777-47213422 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 82-482 |
| Cow position: | chr8:14343013-14342592 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 82-484 |
| Cow position: | chr8:29271736-29271310 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 83-474 |
| Cow position: | chr8:42806731-42807118 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 130, 66 |
| Conread position: | 84-431 |
| Cow position: | chr8:26684293-26683934 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 85-471 |
| Cow position: | chr8:46774265-46774653 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 99-429 |
| Cow position: | chr8:28326337-28325990 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 118-474 |
| Cow position: | chr8:39539681-39540051 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 101, 134 |
| Conread position: | 118-475 |
| Cow position: | chr8:18569236-18568861 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 127-476 |
| Cow position: | chr8:56998468-56998126 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 105 |
| Conread position: | 127-478 |
| Cow position: | chr8:35192260-35192624 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 157, 35 |
| Conread position: | 132-474 |
| Cow position: | chr8:18635377-18635012 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 123 |
| Conread position: | 151-488 |
| Cow position: | chr8:41010042-41010392 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 172-471 |
| Cow position: | chr8:49047659-49047967 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 175-478 |
| Cow position: | chr8:46569445-46569774 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 176-432 |
| Cow position: | chr8:27722052-27722314 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 176-471 |
| Cow position: | chr8:22062148-22062464 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 194-474 |
| Cow position: | chr8:6234855-6235154 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 194-474 |
| Cow position: | chr8:58893016-58893310 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 198-478 |
| Cow position: | chr8:43135570-43135873 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 227-483 |
| Cow position: | chr8:23148396-23148118 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 256-474 |
| Cow position: | chr8:18890201-18890437 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 274-482 |
| Cow position: | chr8:17892907-17893127 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 275-494 |
| Cow position: | chr8:16504212-16503972 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 122 |
Show alignments to all cow chromosomes.