• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rtra07_p17r1.y1
        

               
Conread position:
               
1-159
               

               
Cow position:
               
chr22:12598935-12599093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr22:9734702-9734862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:4974576-4974404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr22:16057547-16057728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr22:26490308-26490500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:10585853-10585670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:30710244-30710438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:41271151-41270968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr22:25629915-25629721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:12800511-12800734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:17993184-17992958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr22:37324394-37324636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 92
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:17132562-17132315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:26134383-26134129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:29013725-29013975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr22:9520994-9521245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr22:14638633-14638376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr22:21355293-21355040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr22:40048405-40048655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr22:17125430-17125684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr22:17152529-17152779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr22:27550203-27550455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr22:8429732-8429992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:21530503-21530250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:35753454-35753202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:46568033-46567785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:46665650-46665389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:2912734-2912480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:14691124-14690861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:15020554-15020303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:15090588-15090852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:26141124-26141384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:26969630-26969899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:3987364-3987629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:18126889-18126624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:24628802-24628548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:42946208-42945937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:10632767-10633027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr22:12681949-12681686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr22:23403799-23403528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr22:34476160-34475884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr22:34712565-34712840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:1563402-1563137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:21012238-21012500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:26316317-26316572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:31510520-31510262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr22:2502683-2502943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr22:8840435-8840722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr22:10420879-10421150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr22:15950531-15950269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr22:28351802-28351552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
161, 8
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:13286298-13286567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:22155453-22155721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:27047553-27047296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:1266082-1265805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 249
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:1654346-1654070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:2623671-2623403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:3316970-3317241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:4017325-4017592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:4108891-4108612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:4119717-4119443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:8418314-8418580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:10302862-10303135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:14366102-14365842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:17814072-17814351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 196
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:19173547-19173821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:21567843-21568111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:23115454-23115187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:23176593-23176321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:29641961-29642228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:30049721-30049447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:32698608-32698879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:32892547-32892813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:33332666-33332957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:34606431-34606708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 236
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:36433118-36432854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:36560809-36560540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:38930662-38930388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:45807688-45807952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:7851811-7852084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr22:8324097-8324357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:5337748-5337475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:30998745-30999009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:845750-846030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:16532928-16533196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:17764228-17764500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 189
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr22:23856897-23857179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:24611232-24610953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:7164801-7165107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:26166772-26166479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:30515100-30515405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:40121030-40120737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr22:10292810-10293098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr22:10981235-10981552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr22:2403724-2404060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 205
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr22:15618462-15618788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr22:6215709-6215375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr22:9127254-9127580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr22:30483765-30484086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:4076047-4075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:4994069-4993733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:10631224-10631571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:14378831-14378509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:20626689-20627016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:21746485-21746821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:25222051-25221720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:34441783-34441449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:864670-864340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 192
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:11613272-11613616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:12313271-12313609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:32480631-32480277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:33399633-33399299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:33949151-33948787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:38940101-38939762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:44717561-44717910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr22:45796191-45796534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr22:1848912-1849266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr22:10532350-10532684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr22:21890508-21890175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:4563210-4563551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:6610501-6610163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:10122239-10122563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:13957797-13957450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:14844422-14844739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:23010090-23009767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:27171407-27171074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:30699027-30699360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:43812571-43812246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr22:534345-534686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr22:5616152-5616494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr22:4356942-4357284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr22:36539821-36539455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr22:15490507-15490859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr22:40349198-40349545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:23805134-23804781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:41245093-41245442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:41853744-41854108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr22:11130718-11131077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr22:15568166-15567814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr22:33448236-33447870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:40071829-40072170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:44740949-44741282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr22:6097177-6096805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr22:4061098-4060735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr22:12573056-12573419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 165
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr22:23759161-23758796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr22:34398610-34398276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr22:37201701-37202066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr22:11600886-11601302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr22:911947-912162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr22:10314924-10315187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr22:10339264-10339001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr22:41982866-41982604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr22:26786206-26786479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr22:43119879-43119610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr22:10161814-10162157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr22:39696140-39696492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr22:26184313-26183986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 264
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr22:8412377-8412727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr22:7884840-7885172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr22:4043782-4043987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr22:3993462-3993674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr22:22160574-22160810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr22:4645623-4645873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr22:25206116-25205860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr22:21408068-21408341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr22:15039332-15039064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr22:23833137-23833414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 265
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr22:13861439-13861696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr22:7967551-7967891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:14178976-14178626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:19341053-19341401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
4-149
               

               
Cow position:
               
chr22:26106909-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
4-157
               

               
Cow position:
               
chr22:18219039-18218885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr22:6123049-6122878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr22:22553384-22553201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:226601-226406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr22:43292046-43291816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr22:1975463-1975702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 194
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr22:1484713-1484958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr22:12946318-12946081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr22:11458679-11458922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr22:46610929-46610670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr22:23854824-23855082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr22:23122171-23121889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr22:3301475-3301225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:1279537-1279266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:1590874-1591142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 256
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:3950101-3950371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:4535473-4535211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:5290697-5290969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:12968220-12967949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:13670323-13670051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:16044570-16044297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:16621021-16621300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:18926206-18926475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:27274839-27274581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr22:32188997-32188735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr22:22908042-22908340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr22:644911-644591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr22:18259075-18259406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr22:25743100-25742776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr22:27322167-27322493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr22:28146535-28146880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr22:590190-590518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:22612962-22613308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr22:3960438-3960094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:4583408-4583771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr22:43397864-43398209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr22:10678132-10677936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr22:26097768-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr22:15153850-15154073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr22:30963973-30964207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr22:6622393-6622147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr22:9283746-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
153, 248
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr22:15760221-15760467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr22:18025707-18025449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr22:45845998-45846249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr22:32895069-32895327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr22:36132650-36132904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr22:2216675-2216919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr22:16822955-16823200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr22:22223043-22223300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
162, 33
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr22:4990316-4990057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr22:26339608-26339872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:530726-530459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:877367-877634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:13840986-13841259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:15025258-15024991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:26658907-26659162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:27740744-27741009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr22:14924880-14924612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr22:34750530-34750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr22:43131699-43131437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr22:44180444-44180714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr22:20862909-20862584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 214
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr22:31646345-31646665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr22:29955145-29954833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr22:7153733-7154065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr22:21205198-21205493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
277, 36
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr22:30269265-30269591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr22:5467522-5467174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 276
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr22:10294895-10295223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr22:15668622-15668288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 181
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr22:24066382-24066049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr22:19787828-19787503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 226
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr22:10685236-10684891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr22:34894823-34895165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr22:19047966-19047622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 188
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr22:15068278-15068490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 115
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr22:23689352-23689109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr22:27825689-27825935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr22:19775578-19775323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr22:4988702-4988450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr22:30111347-30111613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr22:3253095-3252840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr22:8116234-8115969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr22:9668418-9668695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr22:3325438-3325777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr22:25943329-25943649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr22:39508189-39507850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 230
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr22:11146759-11147104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 215
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:40374459-40374811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr22:41898593-41898245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:12315664-12316013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:26151256-26150910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr22:8090675-8090328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr22:1035965-1035613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 242
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr22:1309875-1309530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr22:27835384-27835619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 186
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr22:8732703-8732466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr22:28665139-28665392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr22:16251711-16251455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr22:22861055-22860794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr22:3965038-3965305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr22:23806688-23806422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr22:32661359-32661628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr22:37029745-37029489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr22:27818853-27819180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr22:42612315-42612631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr22:2523820-2524143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
7-335
               

               
Cow position:
               
chr22:14372039-14372363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr22:13300267-13300592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr22:8733477-8733141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
7-347
               

               
Cow position:
               
chr22:5384505-5384841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
8-216
               

               
Cow position:
               
chr22:7838449-7838654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr22:23830787-23831045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr22:25539846-25540116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr22:17224809-17224551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr22:34726527-34726784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr22:40789424-40789740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
8-330
               

               
Cow position:
               
chr22:3533799-3534122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr22:34616159-34616419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr22:16292061-16291725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr22:31593002-31592779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
10-262
               

               
Cow position:
               
chr22:28058197-28057940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr22:25237293-25237022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 230
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr22:41971300-41971036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr22:13769331-13769610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
10-329
               

               
Cow position:
               
chr22:25361344-25361667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
10-334
               

               
Cow position:
               
chr22:11767193-11766853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
10-334
               

               
Cow position:
               
chr22:41829373-41829040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr22:6721216-6720875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr22:28370804-28371142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr22:3241841-3241627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr22:3251135-3250876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr22:21295866-21295606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr22:28071416-28071677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
11-321
               

               
Cow position:
               
chr22:8882876-8883192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
11-334
               

               
Cow position:
               
chr22:34735726-34736043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
11-348
               

               
Cow position:
               
chr22:7913337-7913664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
12-159
               

               
Cow position:
               
chr22:6360630-6360480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
12-215
               

               
Cow position:
               
chr22:10983207-10983413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
12-247
               

               
Cow position:
               
chr22:21325875-21325638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr22:31153815-31154057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr22:8481502-8481759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
12-275
               

               
Cow position:
               
chr22:16273493-16273764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
12-292
               

               
Cow position:
               
chr22:24734453-24734181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
15-271
               

               
Cow position:
               
chr22:27619592-27619854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
15-329
               

               
Cow position:
               
chr22:27223991-27224298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
16-271
               

               
Cow position:
               
chr22:17295067-17294816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
16-347
               

               
Cow position:
               
chr22:27681578-27681932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr22:45513651-45513388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
17-322
               

               
Cow position:
               
chr22:23181172-23180863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
17-347
               

               
Cow position:
               
chr22:44410590-44410924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
18-263
               

               
Cow position:
               
chr22:1870967-1871209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr22:37030653-37030341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
21-265
               

               
Cow position:
               
chr22:27581305-27581552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
24-271
               

               
Cow position:
               
chr22:39215743-39215496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr22:25387195-25387446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
24-336
               

               
Cow position:
               
chr22:12929404-12929081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
24-371
               

               
Cow position:
               
chr22:30818856-30818513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 170
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr22:9372397-9372709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
28-334
               

               
Cow position:
               
chr22:1911546-1911844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr22:6936143-6936365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
31-267
               

               
Cow position:
               
chr22:45132772-45132534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 216
               

               
Conread position:
               
31-278
               

               
Cow position:
               
chr22:19890839-19891085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr22:4011064-4011281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
32-261
               

               
Cow position:
               
chr22:12527245-12527013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
32-267
               

               
Cow position:
               
chr22:2627455-2627695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr22:24176001-24175779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr22:1326299-1326537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr22:10609234-10609475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr22:18196394-18196628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr22:43237527-43237289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr22:10919973-10919721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 84
               

               
Conread position:
               
32-321
               

               
Cow position:
               
chr22:5837148-5837443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 91
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr22:12388977-12389285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr22:31599330-31599623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
32-334
               

               
Cow position:
               
chr22:31870372-31870060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
32-347
               

               
Cow position:
               
chr22:14143232-14142916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
32-349
               

               
Cow position:
               
chr22:27828264-27828586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
33-206
               

               
Cow position:
               
chr22:14835338-14835172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
34-260
               

               
Cow position:
               
chr22:13094280-13094500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
34-261
               

               
Cow position:
               
chr22:15915160-15914943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr22:12341077-12341310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 157
               

               
Conread position:
               
35-271
               

               
Cow position:
               
chr22:617004-617240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr22:12829727-12829492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr22:14091337-14091105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr22:27329004-27328772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
36-321
               

               
Cow position:
               
chr22:12892482-12892179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
36-322
               

               
Cow position:
               
chr22:2123179-2123473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 80
               

               
Conread position:
               
36-335
               

               
Cow position:
               
chr22:18838135-18838446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
37-231
               

               
Cow position:
               
chr22:13849560-13849374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
37-265
               

               
Cow position:
               
chr22:6852698-6852471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 94
               

               
Conread position:
               
39-267
               

               
Cow position:
               
chr22:37947610-37947838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
56, 198
               

               
Conread position:
               
39-270
               

               
Cow position:
               
chr22:3842505-3842735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
40-329
               

               
Cow position:
               
chr22:27508538-27508831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
40-334
               

               
Cow position:
               
chr22:30697048-30697344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
41-224
               

               
Cow position:
               
chr22:17193279-17193462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
41-261
               

               
Cow position:
               
chr22:24509780-24509555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr22:23736122-23735897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
41-322
               

               
Cow position:
               
chr22:12830554-12830263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
42-296
               

               
Cow position:
               
chr22:47555741-47555989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
42-334
               

               
Cow position:
               
chr22:25246806-25247104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
43-329
               

               
Cow position:
               
chr22:26017841-26017570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
43-367
               

               
Cow position:
               
chr22:3282932-3282601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
44-334
               

               
Cow position:
               
chr22:4135510-4135788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
46-262
               

               
Cow position:
               
chr22:13222006-13222227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
46-267
               

               
Cow position:
               
chr22:4541836-4542049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
46-322
               

               
Cow position:
               
chr22:39602176-39602468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
49-271
               

               
Cow position:
               
chr22:29389670-29389898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
49-322
               

               
Cow position:
               
chr22:9597683-9597402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr22:17126355-17126630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr22:26074822-26075040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr22:34104775-34104553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
53-296
               

               
Cow position:
               
chr22:1983753-1983993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
55-330
               

               
Cow position:
               
chr22:25254078-25254365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr22:5595904-5595693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
57-271
               

               
Cow position:
               
chr22:24915742-24915956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
57-276
               

               
Cow position:
               
chr22:11697291-11697071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr22:25809365-25809074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
58-268
               

               
Cow position:
               
chr22:4315534-4315745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr22:18933813-18933596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr22:23750986-23750779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr22:24903496-24903786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
60-252
               

               
Cow position:
               
chr22:18293853-18293665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
60-343
               

               
Cow position:
               
chr22:27275372-27275669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
61-296
               

               
Cow position:
               
chr22:34618705-34618945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
61-329
               

               
Cow position:
               
chr22:17652342-17652622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
62-235
               

               
Cow position:
               
chr22:24222989-24223152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
62-266
               

               
Cow position:
               
chr22:1659072-1659277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
62-271
               

               
Cow position:
               
chr22:10285876-10286089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
62-271
               

               
Cow position:
               
chr22:13878094-13878296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
62-310
               

               
Cow position:
               
chr22:14006091-14006341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
63-322
               

               
Cow position:
               
chr22:25690370-25690095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
64-269
               

               
Cow position:
               
chr22:10533505-10533710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
64-271
               

               
Cow position:
               
chr22:26122809-26123017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr22:12678506-12678226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr22:16541738-16541454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
66-345
               

               
Cow position:
               
chr22:12749985-12749709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
67-316
               

               
Cow position:
               
chr22:10553770-10553522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
71-246
               

               
Cow position:
               
chr22:29344797-29344971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
71-271
               

               
Cow position:
               
chr22:25846402-25846203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
71-348
               

               
Cow position:
               
chr22:1858252-1858531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
72-271
               

               
Cow position:
               
chr22:9171325-9171529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr22:1025810-1026007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr22:42617921-42618116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 179
               

               
Conread position:
               
81-257
               

               
Cow position:
               
chr22:13735086-13734915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
81-258
               

               
Cow position:
               
chr22:28704113-28704290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
81-271
               

               
Cow position:
               
chr22:29185679-29185489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
81-329
               

               
Cow position:
               
chr22:2109694-2109440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
81-334
               

               
Cow position:
               
chr22:6176361-6176087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
81-334
               

               
Cow position:
               
chr22:21526848-21527104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
82-316
               

               
Cow position:
               
chr22:35029195-35029436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
82-329
               

               
Cow position:
               
chr22:12157913-12157659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
83-249
               

               
Cow position:
               
chr22:45752740-45752910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
83-265
               

               
Cow position:
               
chr22:4137720-4137538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
86-347
               

               
Cow position:
               
chr22:2101011-2100740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
88-294
               

               
Cow position:
               
chr22:13720086-13719891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
89-334
               

               
Cow position:
               
chr22:14754939-14755187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
93-271
               

               
Cow position:
               
chr22:28120661-28120843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
97-271
               

               
Cow position:
               
chr22:14139930-14140106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
98-271
               

               
Cow position:
               
chr22:32514236-32514412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 146
               

               
Conread position:
               
101-267
               

               
Cow position:
               
chr22:15737182-15737349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
101-271
               

               
Cow position:
               
chr22:11352503-11352332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
101-329
               

               
Cow position:
               
chr22:13866611-13866858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
101-329
               

               
Cow position:
               
chr22:23676016-23675783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
101-329
               

               
Cow position:
               
chr22:28672094-28672324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
105-265
               

               
Cow position:
               
chr22:12195615-12195455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
105-271
               

               
Cow position:
               
chr22:12188528-12188362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
110-266
               

               
Cow position:
               
chr22:3486817-3486664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
120-261
               

               
Cow position:
               
chr22:7832387-7832245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
120-339
               

               
Cow position:
               
chr22:17184719-17184504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
121-257
               

               
Cow position:
               
chr22:23430663-23430528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
121-267
               

               
Cow position:
               
chr22:16845436-16845289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
121-321
               

               
Cow position:
               
chr22:16265647-16265851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
122-263
               

               
Cow position:
               
chr22:4310403-4310262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
122-271
               

               
Cow position:
               
chr22:1714896-1714746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
122-271
               

               
Cow position:
               
chr22:26803787-26803938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
122-322
               

               
Cow position:
               
chr22:16724718-16724505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 188
               

               
Conread position:
               
122-322
               

               
Cow position:
               
chr22:18847995-18847788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
122-336
               

               
Cow position:
               
chr22:243082-243298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
123-262
               

               
Cow position:
               
chr22:20323677-20323538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
123-262
               

               
Cow position:
               
chr22:42050544-42050680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
123-264
               

               
Cow position:
               
chr22:7074356-7074491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
123-265
               

               
Cow position:
               
chr22:47562673-47562818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-267
               

               
Cow position:
               
chr22:23372894-23372750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr22:6326414-6326563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr22:7362007-7361860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr22:23398434-23398285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
123-275
               

               
Cow position:
               
chr22:30643164-30643010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr22:16806565-16806769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr22:5712558-5712768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr22:4054613-4054413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr22:4156847-4156626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr22:8287157-8287370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
123-333
               

               
Cow position:
               
chr22:3945348-3945553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr22:4657073-4656851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr22:33985830-33985612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
124-265
               

               
Cow position:
               
chr22:45506035-45505892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
124-267
               

               
Cow position:
               
chr22:14676656-14676800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
124-268
               

               
Cow position:
               
chr22:24032244-24032099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
124-271
               

               
Cow position:
               
chr22:18967187-18967042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
124-297
               

               
Cow position:
               
chr22:14381630-14381806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
124-345
               

               
Cow position:
               
chr22:876247-876468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
124-348
               

               
Cow position:
               
chr22:37145298-37145529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
124-349
               

               
Cow position:
               
chr22:35215519-35215761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
125-288
               

               
Cow position:
               
chr22:11344482-11344643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
125-316
               

               
Cow position:
               
chr22:14509505-14509314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
125-322
               

               
Cow position:
               
chr22:3470259-3470472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
126-271
               

               
Cow position:
               
chr22:24802727-24802580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr22:29842731-29842538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 133
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr22:14600361-14600142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr22:40869806-40870025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
126-347
               

               
Cow position:
               
chr22:12447429-12447655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 211
               

               
Conread position:
               
128-322
               

               
Cow position:
               
chr22:10585604-10585413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
129-260
               

               
Cow position:
               
chr22:20846830-20846964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
129-263
               

               
Cow position:
               
chr22:10752566-10752431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
129-270
               

               
Cow position:
               
chr22:2643906-2644046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
129-329
               

               
Cow position:
               
chr22:19645617-19645417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
129-352
               

               
Cow position:
               
chr22:4735999-4736239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr22:6372368-6372165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chr22:24542342-24542559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
133-345
               

               
Cow position:
               
chr22:26417263-26417486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
134-271
               

               
Cow position:
               
chr22:3239893-3240025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
134-328
               

               
Cow position:
               
chr22:2876817-2876609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
134-329
               

               
Cow position:
               
chr22:23249748-23249547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr22:1081770-1081953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
136-330
               

               
Cow position:
               
chr22:26233615-26233824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
137-266
               

               
Cow position:
               
chr22:1838292-1838420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
137-349
               

               
Cow position:
               
chr22:23265669-23265438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
139-271
               

               
Cow position:
               
chr22:31108554-31108687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
139-326
               

               
Cow position:
               
chr22:8330984-8331187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 196
               

               
Conread position:
               
142-262
               

               
Cow position:
               
chr22:1821596-1821475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
142-273
               

               
Cow position:
               
chr22:23400679-23400812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
144-271
               

               
Cow position:
               
chr22:22606216-22606344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
145-271
               

               
Cow position:
               
chr22:16346388-16346515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
145-347
               

               
Cow position:
               
chr22:7086560-7086365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
148-285
               

               
Cow position:
               
chr22:23397981-23397844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 113
               

               
Conread position:
               
148-328
               

               
Cow position:
               
chr22:6360189-6360004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
151-266
               

               
Cow position:
               
chr22:3997751-3997867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
151-271
               

               
Cow position:
               
chr22:44684487-44684604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
152-271
               

               
Cow position:
               
chr22:45684039-45683920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-322
               

               
Cow position:
               
chr22:23630352-23630173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
152-334
               

               
Cow position:
               
chr22:15695724-15695538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
152-334
               

               
Cow position:
               
chr22:27401736-27401928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 159
               

               
Conread position:
               
153-336
               

               
Cow position:
               
chr22:45012753-45012566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
154-274
               

               
Cow position:
               
chr22:12914615-12914736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
154-347
               

               
Cow position:
               
chr22:40864503-40864694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
155-269
               

               
Cow position:
               
chr22:21215715-21215830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
155-271
               

               
Cow position:
               
chr22:31308888-31309003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
155-329
               

               
Cow position:
               
chr22:4026823-4026989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
155-329
               

               
Cow position:
               
chr22:12599373-12599534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
155-329
               

               
Cow position:
               
chr22:12777375-12777194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
157-271
               

               
Cow position:
               
chr22:26107130-26107239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
161-261
               

               
Cow position:
               
chr22:21369287-21369187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-281
               

               
Cow position:
               
chr22:11468384-11468504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-296
               

               
Cow position:
               
chr22:35533223-35533093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
161-320
               

               
Cow position:
               
chr22:6793865-6793699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
161-323
               

               
Cow position:
               
chr22:45772015-45771842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
162-329
               

               
Cow position:
               
chr22:45788620-45788796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
162-349
               

               
Cow position:
               
chr22:30687036-30687229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
164-266
               

               
Cow position:
               
chr22:16916917-16916816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
165-271
               

               
Cow position:
               
chr22:2516894-2516788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-271
               

               
Cow position:
               
chr22:27052720-27052614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-274
               

               
Cow position:
               
chr22:31064416-31064524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
165-329
               

               
Cow position:
               
chr22:29256615-29256774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
166-329
               

               
Cow position:
               
chr22:1830062-1830233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
166-344
               

               
Cow position:
               
chr22:11174137-11173968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
167-329
               

               
Cow position:
               
chr22:8446929-8447097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
167-330
               

               
Cow position:
               
chr22:29090389-29090229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
168-307
               

               
Cow position:
               
chr22:48155442-48155589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
168-334
               

               
Cow position:
               
chr22:9735285-9735463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
169-329
               

               
Cow position:
               
chr22:43730303-43730472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr22:10763803-10763960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
173-303
               

               
Cow position:
               
chr22:18218893-18218764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 108
               

               
Conread position:
               
177-330
               

               
Cow position:
               
chr22:11221209-11221365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
180-329
               

               
Cow position:
               
chr22:1551929-1552085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
181-322
               

               
Cow position:
               
chr22:11837035-11836891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
181-329
               

               
Cow position:
               
chr22:12741243-12741093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
181-346
               

               
Cow position:
               
chr22:19548884-19549047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 119
               
Show alignments to all cow chromosomes.