• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rtra07_p17r1.y1
        

               
Conread position:
               
1-157
               

               
Cow position:
               
chr24:11876712-11876871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr24:30226767-30226923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr24:24137030-24136876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr24:29707977-29707809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr24:40184455-40184609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr24:40983990-40984149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr24:27202424-27202595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr24:34315179-34315355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:39219016-39218839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr24:34782959-34782786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr24:29027871-29028044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr24:35794909-35794731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr24:6487750-6487933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:39833685-39833481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr24:20024438-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr24:27341193-27340977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr24:29180715-29180937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 185
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr24:3152754-3152525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:15707616-15707378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:38814795-38815034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr24:2111581-2111336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr24:27726186-27725932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:40300986-40301238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr24:2096062-2095799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr24:17434438-17434693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr24:34532954-34533204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr24:19736501-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr24:43364186-43364445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr24:27054234-27054501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr24:31324108-31324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 224
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr24:16895609-16895349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr24:18975027-18975301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr24:15861774-15861501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr24:10299910-10300170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr24:11886988-11887251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr24:19535425-19535162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr24:22647515-22647247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr24:18485169-18484900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr24:41068096-41068356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr24:814438-814173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr24:24250555-24250819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 179
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:5633206-5632933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:5754665-5754933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:11119108-11119375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:11840005-11840285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:17294365-17294100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:18390462-18390203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:19466103-19465820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 251
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:19769320-19769593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:20874507-20874779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 210
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:21519264-21519525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:21606834-21606581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
161, 38
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:24457419-24457153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:28496756-28496483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:29781991-29782258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:31359153-31359419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:32070793-32071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:40129949-40130227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:42345178-42344899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr24:10499041-10499313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr24:25677864-25678126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr24:352778-352505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr24:25092357-25092623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 129
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr24:33944231-33944503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr24:39440730-39440466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr24:29063821-29063551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr24:6700542-6700244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:18741744-18741450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:25885333-25885033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:29673346-29673646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 239
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr24:34008751-34008445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr24:37037726-37038049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr24:27267458-27267772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr24:31816416-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr24:13626109-13626448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr24:27824285-27824598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr24:41423436-41423758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr24:41755691-41756013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr24:7917538-7917213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr24:17104743-17104403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr24:28553720-28553403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr24:28721718-28722046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr24:30314205-30313860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 235
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr24:39483304-39483636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 180
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:211812-212144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 222
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:3493719-3494055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:15057227-15057558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:15246808-15246484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:18474918-18474555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:23695066-23694737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:27906265-27906612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:33372381-33372720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr24:10125692-10126054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 342
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr24:30235700-30236058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:30897711-30897373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 235
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr24:42825667-42825325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr24:23187089-23186827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr24:30178063-30178354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr24:24061974-24061708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:15373237-15373503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr24:28062780-28063083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr24:18374606-18374925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr24:2402546-2402215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr24:24491182-24490852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr24:36404316-36403982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
34, 218
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr24:3430563-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr24:28319371-28319118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:33222113-33221834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:37650499-37650765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 220
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr24:40849987-40850250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr24:16268284-16268008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr24:3165650-3165988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr24:5141773-5142112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr24:30229300-30229660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr24:21918392-21918205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr24:27052665-27052418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr24:29679477-29679227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr24:41980839-41980572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 191
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr24:20225571-20225828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr24:29595981-29595714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr24:18331554-18331818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr24:18357223-18356954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr24:42103199-42103458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr24:28253536-28253820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr24:18771358-18771075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr24:28690521-28690820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr24:44041183-44040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
34, 243
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr24:27149227-27149544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr24:35073922-35074244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr24:1269628-1269946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr24:19800676-19801013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr24:25194099-25194440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr24:30484121-30483743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
5-112
               

               
Cow position:
               
chr24:17938593-17938701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr24:885855-885703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 112
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr24:10841385-10841182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr24:8886742-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr24:33724014-33723761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
96, 154
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr24:32204963-32204706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr24:43200445-43200183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr24:12851553-12851800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr24:17311378-17311126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr24:18970677-18970411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr24:12200582-12200311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 241
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr24:16089067-16089325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr24:31159448-31159713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr24:39143439-39143707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 217
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr24:35576704-35576420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr24:28990395-28990722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr24:34396343-34396022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr24:15508706-15508400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr24:27748478-27748789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr24:32822948-32822626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 242
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr24:16994717-16995052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr24:27874430-27874747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr24:29389074-29389391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr24:24755275-24755604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr24:35985891-35985682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr24:28327252-28326994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr24:33153609-33153872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr24:33098660-33098375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr24:33230509-33230772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr24:34742587-34742851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr24:25112039-25112309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr24:6132041-6131720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr24:17955611-17955298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr24:31812020-31812352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr24:32124805-32124484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr24:43635270-43635584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr24:18999879-19000231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr24:27207362-27207215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
7-157
               

               
Cow position:
               
chr24:18695452-18695602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
7-169
               

               
Cow position:
               
chr24:36554999-36554837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr24:18355055-18355278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr24:27290701-27290963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr24:6102657-6102924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:17832981-17832723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:20250067-20249798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:33465775-33465524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:43432625-43432883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr24:32758927-32758596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 158
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr24:42877039-42876706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr24:7913836-7914081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr24:14171860-14171597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 178
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr24:26554767-26554499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
8-329
               

               
Cow position:
               
chr24:16509804-16510140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
8-334
               

               
Cow position:
               
chr24:27844686-27844359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr24:40592550-40592900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
8-352
               

               
Cow position:
               
chr24:17860421-17860072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr24:44987548-44987211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
10-156
               

               
Cow position:
               
chr24:27941173-27941031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
10-171
               

               
Cow position:
               
chr24:42007575-42007738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr24:10012600-10012785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr24:201798-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr24:32370083-32369827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
10-262
               

               
Cow position:
               
chr24:32609478-32609735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 237
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr24:15347428-15347679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr24:14648512-14648261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr24:18017063-18017325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr24:44054318-44054071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr24:6450332-6450589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
10-334
               

               
Cow position:
               
chr24:20801510-20801171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr24:29586830-29587092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
11-329
               

               
Cow position:
               
chr24:37945797-37945477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr24:35332556-35332809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr24:43371085-43371339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr24:5683116-5683377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr24:20943005-20943257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
12-322
               

               
Cow position:
               
chr24:26455677-26455984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
15-321
               

               
Cow position:
               
chr24:19186802-19187093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
17-271
               

               
Cow position:
               
chr24:28289405-28289156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
145, 100
               

               
Conread position:
               
17-345
               

               
Cow position:
               
chr24:7777773-7777449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
20-215
               

               
Cow position:
               
chr24:34564969-34565161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr24:26929099-26928855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
20-263
               

               
Cow position:
               
chr24:43967655-43967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 195
               

               
Conread position:
               
20-297
               

               
Cow position:
               
chr24:32054505-32054790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
20-333
               

               
Cow position:
               
chr24:4724819-4725132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
20-350
               

               
Cow position:
               
chr24:27220245-27219898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
21-263
               

               
Cow position:
               
chr24:2675169-2675400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
21-322
               

               
Cow position:
               
chr24:38841557-38841271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr24:18281788-18281461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
23-271
               

               
Cow position:
               
chr24:18314099-18313835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
23-281
               

               
Cow position:
               
chr24:37395359-37395105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr24:35675394-35675706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
23-344
               

               
Cow position:
               
chr24:34390147-34390456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
26-347
               

               
Cow position:
               
chr24:28233901-28234228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
31-346
               

               
Cow position:
               
chr24:16645465-16645132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr24:389959-390297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
32-242
               

               
Cow position:
               
chr24:19344-19125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr24:26732314-26732536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
32-263
               

               
Cow position:
               
chr24:29170829-29171051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
32-264
               

               
Cow position:
               
chr24:38006846-38006627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
32-265
               

               
Cow position:
               
chr24:24662270-24662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr24:8006170-8006404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
32-304
               

               
Cow position:
               
chr24:32739413-32739144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr24:30545000-30544721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr24:39850025-39849723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
32-345
               

               
Cow position:
               
chr24:14550657-14550976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
32-346
               

               
Cow position:
               
chr24:41985849-41986162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
33-246
               

               
Cow position:
               
chr24:36711061-36711266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
33-267
               

               
Cow position:
               
chr24:43683608-43683369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
33-271
               

               
Cow position:
               
chr24:39905589-39905349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
36-224
               

               
Cow position:
               
chr24:36008349-36008537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr24:23863771-23863531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
36-329
               

               
Cow position:
               
chr24:27713541-27713241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
39-268
               

               
Cow position:
               
chr24:27418232-27418009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
43-265
               

               
Cow position:
               
chr24:34272682-34272902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
43-329
               

               
Cow position:
               
chr24:2359306-2359016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr24:40837648-40837828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
44-334
               

               
Cow position:
               
chr24:24532052-24532345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
45-330
               

               
Cow position:
               
chr24:32194380-32194656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 188
               

               
Conread position:
               
46-322
               

               
Cow position:
               
chr24:29561701-29561417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
47-270
               

               
Cow position:
               
chr24:35150396-35150615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
47-334
               

               
Cow position:
               
chr24:39523573-39523276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
48-271
               

               
Cow position:
               
chr24:39791414-39791638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 210
               

               
Conread position:
               
54-269
               

               
Cow position:
               
chr24:41405779-41405990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
54-330
               

               
Cow position:
               
chr24:43832404-43832692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr24:16895247-16895010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr24:37975097-37974806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
62-287
               

               
Cow position:
               
chr24:27900617-27900840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr24:18614893-18615096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
71-244
               

               
Cow position:
               
chr24:21894946-21895120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr24:34496016-34496213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
71-334
               

               
Cow position:
               
chr24:37823428-37823699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
71-346
               

               
Cow position:
               
chr24:230174-230466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr24:22999914-23000170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
74-263
               

               
Cow position:
               
chr24:12452683-12452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
75-334
               

               
Cow position:
               
chr24:28045653-28045907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
75-339
               

               
Cow position:
               
chr24:28600537-28600257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 244
               

               
Conread position:
               
78-254
               

               
Cow position:
               
chr24:7046843-7046669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
78-264
               

               
Cow position:
               
chr24:28042877-28043066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
78-266
               

               
Cow position:
               
chr24:39911132-39910941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
78-321
               

               
Cow position:
               
chr24:25164938-25165177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
81-334
               

               
Cow position:
               
chr24:20364502-20364242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
84-334
               

               
Cow position:
               
chr24:175586-175334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
84-334
               

               
Cow position:
               
chr24:6151705-6151951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
84-334
               

               
Cow position:
               
chr24:20807446-20807698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
85-295
               

               
Cow position:
               
chr24:27284732-27284938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
102-266
               

               
Cow position:
               
chr24:11007388-11007549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
104-271
               

               
Cow position:
               
chr24:34465577-34465407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
113-424
               

               
Cow position:
               
chr24:11036896-11036573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
116-271
               

               
Cow position:
               
chr24:28355744-28355596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
121-271
               

               
Cow position:
               
chr24:28470733-28470582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
122-254
               

               
Cow position:
               
chr24:34555984-34556115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
122-262
               

               
Cow position:
               
chr24:34896750-34896612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
122-264
               

               
Cow position:
               
chr24:20969715-20969573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
122-358
               

               
Cow position:
               
chr24:2992931-2992680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
123-216
               

               
Cow position:
               
chr24:33598321-33598227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
123-253
               

               
Cow position:
               
chr24:26001336-26001467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-265
               

               
Cow position:
               
chr24:19623805-19623947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
123-270
               

               
Cow position:
               
chr24:17375587-17375736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr24:16118309-16118458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr24:40404859-40404714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr24:41916202-41916418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr24:25122293-25122504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr24:23667169-23666950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
124-252
               

               
Cow position:
               
chr24:29538561-29538427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
124-271
               

               
Cow position:
               
chr24:27202039-27202186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
125-330
               

               
Cow position:
               
chr24:19637534-19637757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
125-346
               

               
Cow position:
               
chr24:28510748-28510978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr24:5360671-5360880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
127-330
               

               
Cow position:
               
chr24:21835006-21834793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
128-326
               

               
Cow position:
               
chr24:32230554-32230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
129-269
               

               
Cow position:
               
chr24:42726405-42726546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
129-334
               

               
Cow position:
               
chr24:10031539-10031748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
130-262
               

               
Cow position:
               
chr24:36303361-36303227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
131-322
               

               
Cow position:
               
chr24:22194371-22194576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
133-271
               

               
Cow position:
               
chr24:41412335-41412199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
138-322
               

               
Cow position:
               
chr24:32891080-32890886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
24, 185
               

               
Conread position:
               
139-347
               

               
Cow position:
               
chr24:26848766-26848553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
143-265
               

               
Cow position:
               
chr24:14786348-14786471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
143-266
               

               
Cow position:
               
chr24:41566126-41566009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
143-322
               

               
Cow position:
               
chr24:36286538-36286730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
144-329
               

               
Cow position:
               
chr24:5152493-5152695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
148-250
               

               
Cow position:
               
chr24:22315430-22315533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
150-275
               

               
Cow position:
               
chr24:29677940-29677811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
150-329
               

               
Cow position:
               
chr24:43349657-43349478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
151-271
               

               
Cow position:
               
chr24:30202801-30202921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
152-266
               

               
Cow position:
               
chr24:27553075-27553187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
155-271
               

               
Cow position:
               
chr24:161984-162101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
155-271
               

               
Cow position:
               
chr24:22235450-22235565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
155-321
               

               
Cow position:
               
chr24:28024260-28024427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 122
               

               
Conread position:
               
155-344
               

               
Cow position:
               
chr24:27810139-27810333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr24:6156837-6157017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
161-271
               

               
Cow position:
               
chr24:7113210-7113320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-329
               

               
Cow position:
               
chr24:27203448-27203622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
161-334
               

               
Cow position:
               
chr24:27940633-27940454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
162-327
               

               
Cow position:
               
chr24:30945594-30945424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
163-265
               

               
Cow position:
               
chr24:39218562-39218460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-271
               

               
Cow position:
               
chr24:256018-256124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-271
               

               
Cow position:
               
chr24:13058015-13058121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
165-271
               

               
Cow position:
               
chr24:32818308-32818204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
165-347
               

               
Cow position:
               
chr24:25971082-25970897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
166-323
               

               
Cow position:
               
chr24:36554705-36554538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 76
               

               
Conread position:
               
166-334
               

               
Cow position:
               
chr24:27279509-27279677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
167-268
               

               
Cow position:
               
chr24:27782209-27782310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-271
               

               
Cow position:
               
chr24:43024259-43024358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-352
               

               
Cow position:
               
chr24:6677648-6677828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
190-357
               

               
Cow position:
               
chr24:27719510-27719333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
195-334
               

               
Cow position:
               
chr24:13114777-13114916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
203-334
               

               
Cow position:
               
chr24:17938722-17938855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
205-329
               

               
Cow position:
               
chr24:2223180-2223052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               
Show alignments to all cow chromosomes.