Cow genome map
| Conread name: | rtra08_o16r1.y1 |
| Conread position: | 134-413 |
| Cow position: | chr1:45673353-45673634 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 174 |
| Conread position: | 175-414 |
| Cow position: | chr1:98380893-98380647 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 188 |
| Conread position: | 182-400 |
| Cow position: | chr1:13637974-13637761 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 204-414 |
| Cow position: | chr1:97755239-97755442 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 207-414 |
| Cow position: | chr1:22628923-22628712 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 112 |
| Conread position: | 207-414 |
| Cow position: | chr1:100421562-100421758 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 208-411 |
| Cow position: | chr1:56228969-56229174 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 208-412 |
| Cow position: | chr1:73756810-73757012 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 120 |
| Conread position: | 208-412 |
| Cow position: | chr1:81859510-81859298 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 132, 60 |
| Conread position: | 208-412 |
| Cow position: | chr1:102756704-102756505 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 208-413 |
| Cow position: | chr1:34300831-34300625 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 60, 145 |
| Conread position: | 208-413 |
| Cow position: | chr1:45289154-45288947 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 208-413 |
| Cow position: | chr1:101551174-101551389 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:8339-8548 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 208-414 |
| Cow position: | chr1:732208-732008 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 153 |
| Conread position: | 208-414 |
| Cow position: | chr1:1801864-1802066 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 208-414 |
| Cow position: | chr1:2075610-2075414 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 208-414 |
| Cow position: | chr1:3323571-3323797 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 208-414 |
| Cow position: | chr1:5409894-5409688 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 208-414 |
| Cow position: | chr1:18937116-18936903 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 208-414 |
| Cow position: | chr1:20125328-20125539 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 208-414 |
| Cow position: | chr1:21092809-21093018 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 208-414 |
| Cow position: | chr1:31348715-31348514 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 208-414 |
| Cow position: | chr1:41181558-41181771 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 60, 122 |
| Conread position: | 208-414 |
| Cow position: | chr1:42256793-42256577 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:52329811-52329603 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 208-414 |
| Cow position: | chr1:52496493-52496709 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:53374151-53374357 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 208-414 |
| Cow position: | chr1:60032881-60032672 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 208-414 |
| Cow position: | chr1:63391055-63390845 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 59 |
| Conread position: | 208-414 |
| Cow position: | chr1:63596344-63596128 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 174 |
| Conread position: | 208-414 |
| Cow position: | chr1:68276124-68276339 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:69941248-69941041 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 208-414 |
| Cow position: | chr1:72035212-72034999 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 208-414 |
| Cow position: | chr1:73561932-73561721 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 208-414 |
| Cow position: | chr1:79590817-79591033 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:81472596-81472799 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 128 |
| Conread position: | 208-414 |
| Cow position: | chr1:83082722-83082931 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 208-414 |
| Cow position: | chr1:83982659-83982444 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 208-414 |
| Cow position: | chr1:87888123-87888326 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 208-414 |
| Cow position: | chr1:94211951-94212160 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:95176652-95176865 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 208-414 |
| Cow position: | chr1:95215461-95215255 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 208-414 |
| Cow position: | chr1:100400481-100400270 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 208-414 |
| Cow position: | chr1:102266554-102266342 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 208-415 |
| Cow position: | chr1:84282778-84283001 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 208-417 |
| Cow position: | chr1:31934230-31934441 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 209-396 |
| Cow position: | chr1:67406366-67406551 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 209-408 |
| Cow position: | chr1:69264540-69264736 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 119 |
| Conread position: | 209-408 |
| Cow position: | chr1:85596664-85596861 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 209-410 |
| Cow position: | chr1:68845762-68845561 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 209-412 |
| Cow position: | chr1:30034267-30034464 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 209-412 |
| Cow position: | chr1:36613557-36613351 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 209-413 |
| Cow position: | chr1:34000623-34000837 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 209-413 |
| Cow position: | chr1:48444460-48444269 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 175, 14 |
| Conread position: | 209-413 |
| Cow position: | chr1:53520630-53520836 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 209-413 |
| Cow position: | chr1:81228613-81228413 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 130, 59 |
| Conread position: | 209-413 |
| Cow position: | chr1:81355985-81355784 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 209-413 |
| Cow position: | chr1:86113695-86113480 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 209-413 |
| Cow position: | chr1:91817053-91816847 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 209-413 |
| Cow position: | chr1:96184290-96184093 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 209-413 |
| Cow position: | chr1:100705852-100706058 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 171, 34 |
| Conread position: | 209-414 |
| Cow position: | chr1:4290863-4291086 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:4589763-4589548 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 166 |
| Conread position: | 209-414 |
| Cow position: | chr1:5873255-5873045 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:8532496-8532288 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 209-414 |
| Cow position: | chr1:11728911-11729107 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 209-414 |
| Cow position: | chr1:22448866-22448661 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 59 |
| Conread position: | 209-414 |
| Cow position: | chr1:24235800-24235591 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 59 |
| Conread position: | 209-414 |
| Cow position: | chr1:33811652-33811855 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 209-414 |
| Cow position: | chr1:36997915-36998121 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 175, 59 |
| Conread position: | 209-414 |
| Cow position: | chr1:39418400-39418195 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 120 |
| Conread position: | 209-414 |
| Cow position: | chr1:43893646-43893851 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 209-414 |
| Cow position: | chr1:47008750-47008957 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 209-414 |
| Cow position: | chr1:48105718-48105508 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:48731106-48730899 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 209-414 |
| Cow position: | chr1:49795718-49795930 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 209-414 |
| Cow position: | chr1:52434986-52435200 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 209-414 |
| Cow position: | chr1:53424910-53425101 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 209-414 |
| Cow position: | chr1:53622686-53622886 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 171, 14 |
| Conread position: | 209-414 |
| Cow position: | chr1:55357562-55357359 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 209-414 |
| Cow position: | chr1:58419642-58419863 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:76748416-76748206 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:78783264-78783477 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:81569318-81569105 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:81613103-81613315 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:82504685-82504900 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:82884667-82884464 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 59 |
| Conread position: | 209-414 |
| Cow position: | chr1:89742294-89742070 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 209-414 |
| Cow position: | chr1:90868720-90868515 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 209-414 |
| Cow position: | chr1:100771016-100770823 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 160, 15 |
| Conread position: | 209-414 |
| Cow position: | chr1:101822778-101822575 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 209-415 |
| Cow position: | chr1:31765677-31765460 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 59 |
| Conread position: | 209-416 |
| Cow position: | chr1:15547187-15547398 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 209-417 |
| Cow position: | chr1:68282512-68282731 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 210-412 |
| Cow position: | chr1:11873636-11873437 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 52 |
| Conread position: | 210-412 |
| Cow position: | chr1:53207976-53207762 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 210-414 |
| Cow position: | chr1:8349590-8349389 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 210-414 |
| Cow position: | chr1:11772362-11772148 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 210-414 |
| Cow position: | chr1:24909372-24909162 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 210-414 |
| Cow position: | chr1:54199661-54199456 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 58 |
| Conread position: | 210-414 |
| Cow position: | chr1:54258287-54258490 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 210-414 |
| Cow position: | chr1:82861492-82861707 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 210-414 |
| Cow position: | chr1:102647550-102647346 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 210-417 |
| Cow position: | chr1:96964038-96964249 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 166 |
| Conread position: | 211-412 |
| Cow position: | chr1:90640745-90640955 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 211-414 |
| Cow position: | chr1:11914152-11913951 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 173, 21 |
| Conread position: | 212-414 |
| Cow position: | chr1:63435082-63434880 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 129, 56 |
| Conread position: | 213-414 |
| Cow position: | chr1:99642649-99642440 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 8, 148 |
| Conread position: | 213-415 |
| Cow position: | chr1:79844191-79844391 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 214-413 |
| Cow position: | chr1:33719837-33720044 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 214-414 |
| Cow position: | chr1:100551685-100551895 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 146 |
| Conread position: | 214-414 |
| Cow position: | chr1:101007892-101007694 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 214-417 |
| Cow position: | chr1:61724302-61724093 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 215-414 |
| Cow position: | chr1:666084-666291 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 129 |
| Conread position: | 215-414 |
| Cow position: | chr1:38278324-38278108 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 215-414 |
| Cow position: | chr1:99609090-99609294 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 216-412 |
| Cow position: | chr1:99638055-99637854 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-414 |
| Cow position: | chr1:32631195-32631393 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 43 |
| Conread position: | 217-414 |
| Cow position: | chr1:1403744-1403555 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 217-414 |
| Cow position: | chr1:61735713-61735506 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 217-414 |
| Cow position: | chr1:89342263-89342069 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 174, 42 |
| Conread position: | 219-414 |
| Cow position: | chr1:4032364-4032554 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 220-412 |
| Cow position: | chr1:23634171-23633981 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 109 |
| Conread position: | 220-414 |
| Cow position: | chr1:33997183-33996992 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 163 |
| Conread position: | 221-414 |
| Cow position: | chr1:21131356-21131169 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 221-414 |
| Cow position: | chr1:26702470-26702281 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 221-415 |
| Cow position: | chr1:24202009-24201820 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 101 |
| Conread position: | 225-399 |
| Cow position: | chr1:54484801-54484980 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 5, 147 |
| Conread position: | 225-412 |
| Cow position: | chr1:52994757-52994950 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 225-414 |
| Cow position: | chr1:24655693-24655889 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 226-412 |
| Cow position: | chr1:19482339-19482149 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 226-414 |
| Cow position: | chr1:13614984-13614787 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 227-414 |
| Cow position: | chr1:88970799-88970985 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 150, 41 |
| Conread position: | 228-414 |
| Cow position: | chr1:52488221-52488035 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 40 |
| Conread position: | 229-414 |
| Cow position: | chr1:56711881-56711693 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 230-414 |
| Cow position: | chr1:79165353-79165159 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 232-410 |
| Cow position: | chr1:95327412-95327227 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 232-412 |
| Cow position: | chr1:3340677-3340865 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 232-414 |
| Cow position: | chr1:12596160-12595978 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 232-414 |
| Cow position: | chr1:33716962-33717154 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 232-414 |
| Cow position: | chr1:41252662-41252475 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 157 |
| Conread position: | 232-414 |
| Cow position: | chr1:48580871-48581057 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 232-414 |
| Cow position: | chr1:82338044-82337855 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 232-414 |
| Cow position: | chr1:84116143-84116324 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 152, 86 |
| Conread position: | 232-415 |
| Cow position: | chr1:7442724-7442910 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 233-414 |
| Cow position: | chr1:16767343-16767157 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 159 |
| Conread position: | 233-414 |
| Cow position: | chr1:90864558-90864367 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 235-414 |
| Cow position: | chr1:75967180-75967357 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 236-414 |
| Cow position: | chr1:3757697-3757882 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 236-414 |
| Cow position: | chr1:45535447-45535631 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 236-414 |
| Cow position: | chr1:97806537-97806714 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 237-412 |
| Cow position: | chr1:21835694-21835869 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 151 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 237-412 |
| Cow position: | chr1:60707149-60707333 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 237-413 |
| Cow position: | chr1:64251303-64251127 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 237-414 |
| Cow position: | chr1:57396183-57396004 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 237-414 |
| Cow position: | chr1:76470405-76470581 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 91 |
| Conread position: | 237-414 |
| Cow position: | chr1:87216206-87216387 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 151 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 6, 79 |
| Conread position: | 239-411 |
| Cow position: | chr1:51394167-51394344 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 239-412 |
| Cow position: | chr1:3776866-3776688 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 239-412 |
| Cow position: | chr1:56748338-56748518 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 239-412 |
| Cow position: | chr1:57639772-57639598 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 100, 142 |
| Conread position: | 239-412 |
| Cow position: | chr1:78794987-78794814 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 130, 149 |
| Conread position: | 239-413 |
| Cow position: | chr1:81180232-81180049 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 239-414 |
| Cow position: | chr1:5135943-5135768 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 146, 94 |
| Conread position: | 239-414 |
| Cow position: | chr1:6941214-6941389 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 239-414 |
| Cow position: | chr1:6958627-6958802 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 239-414 |
| Cow position: | chr1:57247184-57247364 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 239-414 |
| Cow position: | chr1:57635215-57635387 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 142, 103 |
| Conread position: | 239-414 |
| Cow position: | chr1:72141312-72141489 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 239-414 |
| Cow position: | chr1:81363742-81363910 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 239-414 |
| Cow position: | chr1:100450442-100450255 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 239-415 |
| Cow position: | chr1:29901209-29901046 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 240-414 |
| Cow position: | chr1:1185488-1185669 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 240-414 |
| Cow position: | chr1:89395340-89395527 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 241-408 |
| Cow position: | chr1:95071736-95071904 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 142 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 241-410 |
| Cow position: | chr1:42138615-42138789 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 241-414 |
| Cow position: | chr1:31348158-31347990 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 148, 26 |
| Conread position: | 241-414 |
| Cow position: | chr1:36931909-36932083 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 147 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 241-414 |
| Cow position: | chr1:44125887-44125721 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 145, 27 |
| Conread position: | 241-414 |
| Cow position: | chr1:50679536-50679357 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 241-414 |
| Cow position: | chr1:77891563-77891743 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 241-414 |
| Cow position: | chr1:98708192-98708366 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 242-414 |
| Cow position: | chr1:55146552-55146728 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 242-414 |
| Cow position: | chr1:68854926-68855094 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 147, 99 |
| Conread position: | 242-414 |
| Cow position: | chr1:74013516-74013333 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 243-412 |
| Cow position: | chr1:68951384-68951551 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 243-412 |
| Cow position: | chr1:89485343-89485500 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 243-413 |
| Cow position: | chr1:31414206-31414036 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 141, 109 |
| Conread position: | 243-414 |
| Cow position: | chr1:93528442-93528624 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 245-414 |
| Cow position: | chr1:84239353-84239187 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 246-414 |
| Cow position: | chr1:51531528-51531693 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 148 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 246-414 |
| Cow position: | chr1:63905719-63905546 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 247-393 |
| Cow position: | chr1:22227613-22227749 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 247-415 |
| Cow position: | chr1:51445635-51445807 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 248-414 |
| Cow position: | chr1:4293821-4293981 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 248-414 |
| Cow position: | chr1:20002479-20002314 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 249-414 |
| Cow position: | chr1:54732699-54732542 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 250-414 |
| Cow position: | chr1:31235175-31235001 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 251-414 |
| Cow position: | chr1:71079193-71079032 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 252-411 |
| Cow position: | chr1:96635595-96635445 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 252-412 |
| Cow position: | chr1:26729489-26729646 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 252-414 |
| Cow position: | chr1:40531348-40531187 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 254-414 |
| Cow position: | chr1:100512359-100512525 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 256-414 |
| Cow position: | chr1:10655243-10655410 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 256-414 |
| Cow position: | chr1:49839271-49839431 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 258-412 |
| Cow position: | chr1:10942325-10942168 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 258-412 |
| Cow position: | chr1:10964061-10964218 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 259-414 |
| Cow position: | chr1:43389280-43389124 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 141 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 5, 103 |
| Conread position: | 260-414 |
| Cow position: | chr1:43358245-43358086 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 260-414 |
| Cow position: | chr1:43448055-43447906 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 79 |
| Conread position: | 260-415 |
| Cow position: | chr1:6305097-6304936 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 262-412 |
| Cow position: | chr1:79278670-79278523 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 262-414 |
| Cow position: | chr1:7449903-7450056 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 262-414 |
| Cow position: | chr1:64804336-64804176 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 262-414 |
| Cow position: | chr1:78809655-78809806 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 122, 90 |
| Conread position: | 263-414 |
| Cow position: | chr1:7186560-7186721 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 263-414 |
| Cow position: | chr1:26200993-26201145 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 129 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 263-415 |
| Cow position: | chr1:95050327-95050169 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 267-413 |
| Cow position: | chr1:26943088-26943232 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 267-414 |
| Cow position: | chr1:90976307-90976159 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 268-413 |
| Cow position: | chr1:49317735-49317571 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 268-414 |
| Cow position: | chr1:34771726-34771578 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 268-414 |
| Cow position: | chr1:43872553-43872405 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 269-414 |
| Cow position: | chr1:52956038-52956179 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 271-414 |
| Cow position: | chr1:53671969-53671815 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 272-406 |
| Cow position: | chr1:98558002-98557858 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 277-414 |
| Cow position: | chr1:98310847-98310994 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 278-413 |
| Cow position: | chr1:16962226-16962084 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 281-413 |
| Cow position: | chr1:95654925-95654787 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 281-414 |
| Cow position: | chr1:41954463-41954319 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 283-414 |
| Cow position: | chr1:43340830-43340686 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 285-412 |
| Cow position: | chr1:75141801-75141928 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 285-414 |
| Cow position: | chr1:32013751-32013882 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 285-414 |
| Cow position: | chr1:101867150-101867277 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 287-414 |
| Cow position: | chr1:46030556-46030430 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 288-412 |
| Cow position: | chr1:99570667-99570541 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 31 |
| Conread position: | 288-414 |
| Cow position: | chr1:28563771-28563641 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 288-414 |
| Cow position: | chr1:72103644-72103775 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 289-414 |
| Cow position: | chr1:89438137-89438012 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 290-414 |
| Cow position: | chr1:49753730-49753854 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-414 |
| Cow position: | chr1:81470929-81471058 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 292-413 |
| Cow position: | chr1:51654212-51654336 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 296-414 |
| Cow position: | chr1:82443651-82443530 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 298-414 |
| Cow position: | chr1:83594000-83593877 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 301-413 |
| Cow position: | chr1:71227887-71228011 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 302-414 |
| Cow position: | chr1:33207063-33206945 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 304-414 |
| Cow position: | chr1:42398383-42398268 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 304-414 |
| Cow position: | chr1:63530394-63530500 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 31 |
| Conread position: | 304-414 |
| Cow position: | chr1:89082921-89083036 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 306-414 |
| Cow position: | chr1:3243754-3243864 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 306-414 |
| Cow position: | chr1:68763866-68763757 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 306-414 |
| Cow position: | chr1:86578764-86578876 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 311-414 |
| Cow position: | chr1:20667921-20667816 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 315-415 |
| Cow position: | chr1:100474142-100474040 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.