Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 187-414
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 9, 189

Conread position: 199-414
Cow position:
Alignm length: 223
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 205-414
Cow position:
Alignm length: 220
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 208-408
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 62, 28

Conread position: 208-412
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 176, 16

Conread position: 208-412
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 25

Conread position: 208-413
Cow position:
Alignm length: 209
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 196

Conread position: 208-413
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 160

Conread position: 208-413
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 140

Conread position: 208-413
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 143, 37

Conread position: 208-414
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 15

Conread position: 208-414
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 15

Conread position: 208-414
Cow position:
Alignm length: 216
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 208-414
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 111, 51

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 20

Conread position: 208-414
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 13

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 18

Conread position: 208-414
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 140

Conread position: 208-414
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 126, 60

Conread position: 208-414
Cow position:
Alignm length: 210
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 137

Conread position: 208-414
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 8

Conread position: 208-414
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 0

Conread position: 208-417
Cow position:
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 208-417
Cow position:
Alignm length: 217
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 126, 13

Conread position: 209-407
Cow position:
Alignm length: 208
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 79

Conread position: 209-411
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 78

Conread position: 209-411
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 65

Conread position: 209-412
Cow position:
Alignm length: 214
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 209-412
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 175, 15

Conread position: 209-412
Cow position:
Alignm length: 204
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 209-412
Cow position:
Alignm length: 204
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 209-413
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 209-414
Cow position:
Alignm length: 219
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 56, 160

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 59

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 175, 49

Conread position: 209-414
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 209-414
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 54, 92

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 14

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 116

Conread position: 209-415
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 55, 104

Conread position: 210-412
Cow position:
Alignm length: 205
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 93

Conread position: 210-414
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 13

Conread position: 210-414
Cow position:
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 210-417
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 102

Conread position: 211-412
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 129

Conread position: 211-413
Cow position:
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 39

Conread position: 211-414
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 173, 57

Conread position: 211-414
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 211-417
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 52, 133

Conread position: 212-414
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 21, 13

Conread position: 215-414
Cow position:
Alignm length: 205
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 218-414
Cow position:
Alignm length: 204
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 219-414
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 221-414
Cow position:
Alignm length: 204
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 221-414
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 224-414
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 6

Conread position: 224-415
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 9

Conread position: 225-414
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 47

Conread position: 228-414
Cow position:
Alignm length: 197
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 229-414
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 70

Conread position: 230-413
Cow position:
Alignm length: 190
Alignm identity: 155
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 101, 48

Conread position: 232-414
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 74

Conread position: 232-414
Cow position:
Alignm length: 190
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 36

Conread position: 233-414
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 26

Conread position: 234-414
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 236-411
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 69

Conread position: 236-412
Cow position:
Alignm length: 181
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 236-413
Cow position:
Alignm length: 181
Alignm identity: 151
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 32, 116

Conread position: 236-414
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 236-414
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 7, 53

Conread position: 239-410
Cow position:
Alignm length: 175
Alignm identity: 142
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 29, 83

Conread position: 239-412
Cow position:
Alignm length: 177
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 106

Conread position: 239-414
Cow position:
Alignm length: 178
Alignm identity: 149
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 239-414
Cow position:
Alignm length: 179
Alignm identity: 147
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 175

Conread position: 239-414
Cow position:
Alignm length: 181
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 77

Conread position: 239-414
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 38

Conread position: 239-417
Cow position:
Alignm length: 182
Alignm identity: 148
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 28, 115

Conread position: 240-413
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 240-414
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 242-414
Cow position:
Alignm length: 180
Alignm identity: 151
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 242-415
Cow position:
Alignm length: 183
Alignm identity: 151
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 243-414
Cow position:
Alignm length: 175
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 89

Conread position: 246-414
Cow position:
Alignm length: 178
Alignm identity: 150
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 55, 0

Conread position: 246-414
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 16

Conread position: 247-410
Cow position:
Alignm length: 168
Alignm identity: 139
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 92

Conread position: 249-412
Cow position:
Alignm length: 173
Alignm identity: 146
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 249-414
Cow position:
Alignm length: 170
Alignm identity: 140
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 251-414
Cow position:
Alignm length: 166
Alignm identity: 140
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 134, 25

Conread position: 252-412
Cow position:
Alignm length: 170
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 256-414
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 262-412
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 262-414
Cow position:
Alignm length: 158
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 272-414
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 273-414
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 87

Conread position: 273-414
Cow position:
Alignm length: 145
Alignm identity: 124
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 111, 66

Conread position: 276-414
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 276-414
Cow position:
Alignm length: 146
Alignm identity: 123
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 276-414
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 107, 12

Conread position: 278-414
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 289-411
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 289-412
Cow position:
Alignm length: 129
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 108

Conread position: 297-414
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 299-414
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 302-414
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 310-413
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.