Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 176-396
Cow position: chr16:27701567-27701338 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 93, 189

Conread position: 182-414
Cow position: chr16:11105232-11105472 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 30

Conread position: 186-414
Cow position: chr16:23810610-23810832 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 133

Conread position: 197-413
Cow position: chr16:3614447-3614664 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 71, 156

Conread position: 202-414
Cow position: chr16:49169678-49169465 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 11

Conread position: 208-408
Cow position: chr16:29823218-29823009 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 208-413
Cow position: chr16:8481373-8481169 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 152, 15

Conread position: 208-413
Cow position: chr16:8840602-8840814 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 208-413
Cow position: chr16:19757076-19756879 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 208-413
Cow position: chr16:42217983-42217767 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 208-414
Cow position: chr16:2223696-2223482 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 208-414
Cow position: chr16:3633826-3634032 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 15

Conread position: 208-414
Cow position: chr16:4502990-4503202 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 208-414
Cow position: chr16:4972315-4972101 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 208-414
Cow position: chr16:7542001-7542206 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 174, 60

Conread position: 208-414
Cow position: chr16:14360817-14361026 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 60

Conread position: 208-414
Cow position: chr16:15726651-15726448 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 208-414
Cow position: chr16:15808686-15808894 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 137, 36

Conread position: 208-414
Cow position: chr16:17665348-17665557 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 126, 15

Conread position: 208-414
Cow position: chr16:26610352-26610560 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 24

Conread position: 208-414
Cow position: chr16:30290026-30290239 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position: chr16:32132239-32132445 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 108

Conread position: 208-414
Cow position: chr16:35343765-35343550 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 86

Conread position: 208-414
Cow position: chr16:42253860-42253646 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 60

Conread position: 208-414
Cow position: chr16:44973198-44973415 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 25, 106

Conread position: 208-414
Cow position: chr16:45609696-45609910 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 208-414
Cow position: chr16:48087160-48086948 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 208-414
Cow position: chr16:51113166-51112957 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 208-414
Cow position: chr16:53813947-53813734 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 28

Conread position: 208-417
Cow position: chr16:24228640-24228426 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-412
Cow position: chr16:8807379-8807173 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 118

Conread position: 209-412
Cow position: chr16:29066879-29067086 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-412
Cow position: chr16:30143503-30143287 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 209-412
Cow position: chr16:39646271-39646468 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 175, 78

Conread position: 209-412
Cow position: chr16:47017533-47017327 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 0

Conread position: 209-412
Cow position: chr16:53509277-53509065 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 62

Conread position: 209-413
Cow position: chr16:4103449-4103240 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 58

Conread position: 209-413
Cow position: chr16:8026130-8025928 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 176, 27

Conread position: 209-413
Cow position: chr16:13307151-13306945 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 12

Conread position: 209-413
Cow position: chr16:19643606-19643807 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 93

Conread position: 209-413
Cow position: chr16:23871941-23871728 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 209-413
Cow position: chr16:42339915-42340115 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 23

Conread position: 209-413
Cow position: chr16:55308824-55308616 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 28, 135

Conread position: 209-414
Cow position: chr16:1549163-1548955 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 50

Conread position: 209-414
Cow position: chr16:4699252-4699061 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 174, 23

Conread position: 209-414
Cow position: chr16:4910817-4910607 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 209-414
Cow position: chr16:5726641-5726842 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 168
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 175, 24

Conread position: 209-414
Cow position: chr16:7498780-7498980 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 175, 128

Conread position: 209-414
Cow position: chr16:8620961-8621152 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 82

Conread position: 209-414
Cow position: chr16:9497562-9497356 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 209-414
Cow position: chr16:9811779-9811569 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 209-414
Cow position: chr16:11568399-11568197 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 49

Conread position: 209-414
Cow position: chr16:13791216-13791437 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 209-414
Cow position: chr16:15363464-15363664 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 24

Conread position: 209-414
Cow position: chr16:15824727-15824525 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 173, 49

Conread position: 209-414
Cow position: chr16:23472454-23472667 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 25, 137

Conread position: 209-414
Cow position: chr16:24825778-24825991 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position: chr16:29158843-29159051 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 67

Conread position: 209-414
Cow position: chr16:31159860-31159652 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 125, 32

Conread position: 209-414
Cow position: chr16:31978477-31978265 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 209-414
Cow position: chr16:33299104-33299315 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 54, 27

Conread position: 209-414
Cow position: chr16:35187965-35188174 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 209-414
Cow position: chr16:42242407-42242196 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 81

Conread position: 209-414
Cow position: chr16:43275733-43275941 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 209-414
Cow position: chr16:43801182-43800999 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 57

Conread position: 209-414
Cow position: chr16:43804210-43804417 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 209-414
Cow position: chr16:49125809-49125609 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 79

Conread position: 209-414
Cow position: chr16:49230059-49229853 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 14

Conread position: 209-414
Cow position: chr16:51598891-51598686 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 176, 130

Conread position: 209-414
Cow position: chr16:53225094-53224894 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 58, 147

Conread position: 209-415
Cow position: chr16:33777530-33777735 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 99

Conread position: 209-417
Cow position: chr16:7083022-7082811 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 131

Conread position: 210-412
Cow position: chr16:10040127-10039921 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 144

Conread position: 210-414
Cow position: chr16:14028909-14028707 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 62

Conread position: 210-414
Cow position: chr16:29766056-29766257 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 104

Conread position: 210-414
Cow position: chr16:30311397-30311190 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 117

Conread position: 211-414
Cow position: chr16:9790917-9790711 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 52, 14

Conread position: 211-414
Cow position: chr16:16265384-16265180 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 25

Conread position: 211-414
Cow position: chr16:18758123-18757921 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 58

Conread position: 211-414
Cow position: chr16:44676599-44676792 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 61

Conread position: 211-414
Cow position: chr16:53627711-53627508 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 211-417
Cow position: chr16:819964-820171 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 139

Conread position: 211-417
Cow position: chr16:33507775-33507989 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 212-414
Cow position: chr16:600659-600871 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 213-414
Cow position: chr16:33751911-33752116 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 8, 148

Conread position: 213-417
Cow position: chr16:12633619-12633809 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 169, 55

Conread position: 214-415
Cow position: chr16:3246476-3246284 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 170, 90

Conread position: 215-414
Cow position: chr16:23823302-23823095 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 215-414
Cow position: chr16:34168312-34168517 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 215-414
Cow position: chr16:43308843-43308642 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 19

Conread position: 215-414
Cow position: chr16:46655000-46655205 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 15

Conread position: 217-414
Cow position: chr16:52855297-52855104 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 41

Conread position: 218-414
Cow position: chr16:29379974-29380176 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 219-414
Cow position: chr16:35937057-35937257 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 159

Conread position: 221-412
Cow position: chr16:15188919-15189103 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 97

Conread position: 221-412
Cow position: chr16:18354228-18354031 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 221-414
Cow position: chr16:4981648-4981463 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 76

Conread position: 221-414
Cow position: chr16:11775328-11775129 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 221-414
Cow position: chr16:26500884-26501076 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 221-414
Cow position: chr16:37379990-37380188 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 115

Conread position: 221-414
Cow position: chr16:39417384-39417198 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 164, 15

Conread position: 221-414
Cow position: chr16:41037407-41037614 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 221-414
Cow position: chr16:56912997-56912797 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 9

Conread position: 221-415
Cow position: chr16:16096462-16096657 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 47

Conread position: 222-414
Cow position: chr16:30209487-30209675 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 162, 98

Conread position: 225-414
Cow position: chr16:20476259-20476457 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 147

Conread position: 226-414
Cow position: chr16:21450576-21450766 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 82

Conread position: 227-415
Cow position: chr16:675223-675420 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 107, 0

Conread position: 229-414
Cow position: chr16:7429109-7429297 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 77

Conread position: 229-414
Cow position: chr16:13611714-13611534 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 39

Conread position: 229-414
Cow position: chr16:24672628-24672435 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 229-414
Cow position: chr16:53892051-53891862 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 232-412
Cow position: chr16:902153-901965 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 153
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 232-414
Cow position: chr16:7665366-7665556 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 232-414
Cow position: chr16:8315439-8315265 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 9

Conread position: 232-414
Cow position: chr16:8522652-8522473 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 13

Conread position: 232-414
Cow position: chr16:14758473-14758653 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 106, 36

Conread position: 232-414
Cow position: chr16:16231817-16232006 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 106, 0

Conread position: 232-414
Cow position: chr16:18402430-18402604 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 92

Conread position: 232-414
Cow position: chr16:25484102-25484284 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 95, 126

Conread position: 232-414
Cow position: chr16:47662447-47662633 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 121

Conread position: 232-414
Cow position: chr16:50282695-50282506 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 9

Conread position: 232-417
Cow position: chr16:20025178-20025369 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 36, 101

Conread position: 233-412
Cow position: chr16:498851-499021 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 119

Conread position: 233-414
Cow position: chr16:13713179-13712992 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 26

Conread position: 233-414
Cow position: chr16:17745569-17745753 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 233-414
Cow position: chr16:24403465-24403659 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 233-414
Cow position: chr16:37116809-37116993 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 156
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 29, 108

Conread position: 233-418
Cow position: chr16:590174-589993 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 105

Conread position: 235-414
Cow position: chr16:43661190-43661364 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 28, 86

Conread position: 236-414
Cow position: chr16:11103088-11102903 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 237-414
Cow position: chr16:5740994-5741163 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 31

Conread position: 237-414
Cow position: chr16:22868438-22868253 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 155
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 237-414
Cow position: chr16:35623511-35623322 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 239-410
Cow position: chr16:11619495-11619666 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 95

Conread position: 239-412
Cow position: chr16:34483702-34483859 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 239-413
Cow position: chr16:30515839-30515673 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 29

Conread position: 239-414
Cow position: chr16:18205712-18205880 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 96

Conread position: 239-414
Cow position: chr16:23681113-23681287 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 101

Conread position: 239-414
Cow position: chr16:44744391-44744214 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 81

Conread position: 239-414
Cow position: chr16:48145658-48145483 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 94

Conread position: 239-414
Cow position: chr16:48385660-48385481 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 0

Conread position: 240-414
Cow position: chr16:24702594-24702772 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 240-414
Cow position: chr16:35195868-35195683 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 0

Conread position: 240-414
Cow position: chr16:37452874-37452696 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 57

Conread position: 240-414
Cow position: chr16:47245330-47245507 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 98

Conread position: 240-414
Cow position: chr16:52182026-52182191 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 42

Conread position: 242-412
Cow position: chr16:56082617-56082445 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 242-413
Cow position: chr16:8933675-8933505 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 145, 74

Conread position: 242-414
Cow position: chr16:45534929-45535100 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 139, 20

Conread position: 245-414
Cow position: chr16:46353827-46353667 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 78

Conread position: 246-414
Cow position: chr16:571168-570994 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 87, 0

Conread position: 246-414
Cow position: chr16:22842305-22842139 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 107

Conread position: 247-413
Cow position: chr16:42633999-42633832 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 16, 76

Conread position: 247-414
Cow position: chr16:11008093-11008263 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 11

Conread position: 247-414
Cow position: chr16:55042816-55042637 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 34

Conread position: 247-415
Cow position: chr16:26373202-26373031 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 103

Conread position: 248-414
Cow position: chr16:14568734-14568564 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 142
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 249-414
Cow position: chr16:33588419-33588589 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 250-413
Cow position: chr16:45703224-45703049 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 251-414
Cow position: chr16:47620133-47620300 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 139
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 253-413
Cow position: chr16:46176284-46176121 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 59

Conread position: 255-414
Cow position: chr16:47336487-47336651 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 143
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 256-414
Cow position: chr16:4134625-4134792 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 258-414
Cow position: chr16:7152414-7152252 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 261-414
Cow position: chr16:10148045-10148200 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 70

Conread position: 261-414
Cow position: chr16:30037230-30037072 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 78, 25

Conread position: 261-414
Cow position: chr16:32327416-32327570 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 130
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 121, 0

Conread position: 262-408
Cow position: chr16:36203850-36203704 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 91

Conread position: 262-414
Cow position: chr16:29399758-29399920 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 263-410
Cow position: chr16:39695711-39695554 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 71, 0

Conread position: 263-414
Cow position: chr16:5896185-5896338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 129
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 117, 0

Conread position: 264-410
Cow position: chr16:21904930-21905081 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 126
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 62, 7

Conread position: 265-414
Cow position: chr16:26342045-26342194 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 126
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 61

Conread position: 265-414
Cow position: chr16:33791076-33790912 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 266-412
Cow position: chr16:32302218-32302073 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 114, 63

Conread position: 266-413
Cow position: chr16:24616550-24616703 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 15

Conread position: 268-414
Cow position: chr16:15504755-15504600 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 269-413
Cow position: chr16:7928366-7928512 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 13

Conread position: 269-414
Cow position: chr16:50288929-50289069 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 66

Conread position: 270-414
Cow position: chr16:49336000-49336148 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 91

Conread position: 271-414
Cow position: chr16:24747083-24747219 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 37

Conread position: 271-418
Cow position: chr16:43105739-43105589 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 127
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 272-414
Cow position: chr16:20634103-20633959 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 272-414
Cow position: chr16:26703140-26702996 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 54

Conread position: 272-414
Cow position: chr16:53595747-53595601 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 42

Conread position: 276-414
Cow position: chr16:28396316-28396177 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 15

Conread position: 276-414
Cow position: chr16:30705886-30706030 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 6

Conread position: 278-414
Cow position: chr16:42443935-42444075 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 8

Conread position: 278-414
Cow position: chr16:47643200-47643334 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 61

Conread position: 278-414
Cow position: chr16:56787996-56787856 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 106, 17

Conread position: 280-414
Cow position: chr16:28692927-28692800 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 30

Conread position: 281-414
Cow position: chr16:594445-594307 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 285-414
Cow position: chr16:22860971-22860841 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 67

Conread position: 288-414
Cow position: chr16:41530500-41530371 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 290-414
Cow position: chr16:8069025-8068901 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 45

Conread position: 291-413
Cow position: chr16:9787354-9787485 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 291-413
Cow position: chr16:10462723-10462600 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 76

Conread position: 291-414
Cow position: chr16:11957790-11957664 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 293-414
Cow position: chr16:17982348-17982222 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 17

Conread position: 296-415
Cow position: chr16:49404356-49404231 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 297-412
Cow position: chr16:52275330-52275213 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 297-414
Cow position: chr16:39237743-39237864 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 103

Conread position: 298-414
Cow position: chr16:16552363-16552484 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 298-414
Cow position: chr16:17626731-17626850 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 305-414
Cow position: chr16:20205260-20205377 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 306-414
Cow position: chr16:54083843-54083955 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 310-414
Cow position: chr16:17288754-17288860 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 328-414
Cow position: chr16:9136007-9136096 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.