Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 183-412
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 133, 19

Conread position: 208-412
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 24

Conread position: 208-412
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 147

Conread position: 208-413
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 208-413
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 142, 15

Conread position: 208-413
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 111

Conread position: 208-413
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 55, 156

Conread position: 208-414
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 28

Conread position: 208-414
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 174, 59

Conread position: 208-414
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 146, 68

Conread position: 208-414
Cow position:
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 208-414
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 61, 145

Conread position: 208-414
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 208-414
Cow position:
Alignm length: 211
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 131

Conread position: 208-414
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 164, 94

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 19

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 60, 100

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 24

Conread position: 208-414
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 209-410
Cow position:
Alignm length: 205
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 144

Conread position: 209-412
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 206

Conread position: 209-412
Cow position:
Alignm length: 208
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 209-412
Cow position:
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 209-413
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 209-413
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 7

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 91

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 59

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 86

Conread position: 209-414
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 176, 14

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 45

Conread position: 209-414
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 12

Conread position: 209-414
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 59, 127

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 115

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 141

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 209-414
Cow position:
Alignm length: 223
Alignm identity: 179
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 14, 160

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 127

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 209-418
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 210-413
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 44

Conread position: 210-414
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 210-414
Cow position:
Alignm length: 207
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 9

Conread position: 210-414
Cow position:
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 211-414
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 148, 43

Conread position: 211-414
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 211-414
Cow position:
Alignm length: 206
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 174, 17

Conread position: 211-414
Cow position:
Alignm length: 214
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 211-414
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 143

Conread position: 212-399
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 213-412
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 13

Conread position: 213-414
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 7

Conread position: 214-414
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 170, 108

Conread position: 215-414
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 215-414
Cow position:
Alignm length: 209
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 17

Conread position: 215-414
Cow position:
Alignm length: 205
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 106

Conread position: 215-414
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 15

Conread position: 216-414
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 217-414
Cow position:
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 159

Conread position: 218-412
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 116, 8

Conread position: 218-414
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 167, 108

Conread position: 218-418
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 9

Conread position: 221-413
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 221-414
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 221-414
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 224-414
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 62

Conread position: 225-414
Cow position:
Alignm length: 195
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 65

Conread position: 231-414
Cow position:
Alignm length: 192
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 64

Conread position: 231-414
Cow position:
Alignm length: 189
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 10

Conread position: 232-412
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 31, 85

Conread position: 232-414
Cow position:
Alignm length: 187
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 232-414
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 16

Conread position: 233-413
Cow position:
Alignm length: 187
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 233-415
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 44

Conread position: 234-414
Cow position:
Alignm length: 189
Alignm identity: 155
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 236-402
Cow position:
Alignm length: 173
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 41

Conread position: 236-412
Cow position:
Alignm length: 182
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 236-414
Cow position:
Alignm length: 185
Alignm identity: 148
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 94

Conread position: 236-414
Cow position:
Alignm length: 187
Alignm identity: 152
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 0

Conread position: 237-414
Cow position:
Alignm length: 182
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 239-410
Cow position:
Alignm length: 177
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 54

Conread position: 239-412
Cow position:
Alignm length: 178
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 144, 102

Conread position: 239-413
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 86

Conread position: 239-414
Cow position:
Alignm length: 180
Alignm identity: 148
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 77

Conread position: 239-414
Cow position:
Alignm length: 180
Alignm identity: 145
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 29, 108

Conread position: 239-414
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 16

Conread position: 239-414
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 84

Conread position: 239-414
Cow position:
Alignm length: 183
Alignm identity: 151
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 239-414
Cow position:
Alignm length: 178
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 102

Conread position: 239-414
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 95, 66

Conread position: 239-414
Cow position:
Alignm length: 181
Alignm identity: 151
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 145, 66

Conread position: 239-414
Cow position:
Alignm length: 179
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 84

Conread position: 239-414
Cow position:
Alignm length: 183
Alignm identity: 150
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 240-414
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 28, 39

Conread position: 241-414
Cow position:
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 241-414
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 49

Conread position: 241-414
Cow position:
Alignm length: 177
Alignm identity: 145
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 242-414
Cow position:
Alignm length: 178
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 243-414
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 90

Conread position: 244-414
Cow position:
Alignm length: 174
Alignm identity: 143
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 8

Conread position: 246-414
Cow position:
Alignm length: 176
Alignm identity: 148
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 9

Conread position: 248-412
Cow position:
Alignm length: 175
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 248-414
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 252-414
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 44

Conread position: 259-414
Cow position:
Alignm length: 160
Alignm identity: 132
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 6, 114

Conread position: 259-415
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 120

Conread position: 261-412
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 30

Conread position: 261-414
Cow position:
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 101

Conread position: 261-414
Cow position:
Alignm length: 161
Alignm identity: 132
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 262-389
Cow position:
Alignm length: 132
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 16

Conread position: 262-403
Cow position:
Alignm length: 146
Alignm identity: 122
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 262-414
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 76

Conread position: 265-414
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 265-414
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 25

Conread position: 267-414
Cow position:
Alignm length: 151
Alignm identity: 123
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 269-414
Cow position:
Alignm length: 148
Alignm identity: 123
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 116, 74

Conread position: 270-414
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 25

Conread position: 276-406
Cow position:
Alignm length: 133
Alignm identity: 115
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 108, 61

Conread position: 278-414
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 279-413
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 58

Conread position: 280-414
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 282-414
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 287-416
Cow position:
Alignm length: 135
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 288-414
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 292-414
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 92, 29

Conread position: 294-414
Cow position:
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 41

Conread position: 295-414
Cow position:
Alignm length: 121
Alignm identity: 105
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 57

Conread position: 306-414
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 306-414
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.