Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 178-414
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 32, 12

Conread position: 183-417
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 19

Conread position: 208-412
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 208-413
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 68

Conread position: 208-413
Cow position:
Alignm length: 208
Alignm identity: 169
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 172, 24

Conread position: 208-414
Cow position:
Alignm length: 208
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 22

Conread position: 208-414
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 208-414
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 17, 0

Conread position: 208-414
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 131

Conread position: 208-414
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 51

Conread position: 208-414
Cow position:
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 43

Conread position: 209-412
Cow position:
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 14

Conread position: 209-412
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 54, 152

Conread position: 209-413
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 133

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 116

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 171, 58

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 14

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 78

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 175, 102

Conread position: 209-414
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 176, 22

Conread position: 209-414
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 25

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 59

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 178, 142

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 163

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 114

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 129

Conread position: 209-414
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 165

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 171, 14

Conread position: 209-414
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 60, 107

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 118

Conread position: 209-414
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 209-414
Cow position:
Alignm length: 218
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 50

Conread position: 209-415
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-415
Cow position:
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 210-412
Cow position:
Alignm length: 205
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 58

Conread position: 210-413
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 62, 0

Conread position: 210-414
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 55, 71

Conread position: 210-414
Cow position:
Alignm length: 208
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 13

Conread position: 210-414
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 129, 192

Conread position: 210-414
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 210-414
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 10

Conread position: 210-414
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 77

Conread position: 210-415
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 62

Conread position: 210-415
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 131

Conread position: 211-414
Cow position:
Alignm length: 210
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 144

Conread position: 211-414
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 211-414
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 22

Conread position: 211-415
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 38

Conread position: 213-414
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 78

Conread position: 215-414
Cow position:
Alignm length: 206
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 21

Conread position: 221-412
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 151, 47

Conread position: 221-414
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 9

Conread position: 221-414
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 156, 0

Conread position: 225-410
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 5, 59

Conread position: 225-414
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 54

Conread position: 229-414
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 110, 30

Conread position: 231-414
Cow position:
Alignm length: 187
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 100

Conread position: 232-411
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 24

Conread position: 232-413
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 47

Conread position: 232-414
Cow position:
Alignm length: 188
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 150, 27

Conread position: 232-414
Cow position:
Alignm length: 190
Alignm identity: 160
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 68

Conread position: 232-414
Cow position:
Alignm length: 187
Alignm identity: 155
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 39, 86

Conread position: 233-414
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 120

Conread position: 233-414
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 21

Conread position: 233-414
Cow position:
Alignm length: 189
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 140

Conread position: 236-414
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 92

Conread position: 236-414
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 32

Conread position: 236-414
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 32

Conread position: 236-414
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 237-412
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 143, 29

Conread position: 237-413
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 143, 31

Conread position: 237-414
Cow position:
Alignm length: 182
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 237-414
Cow position:
Alignm length: 182
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 237-414
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 31, 19

Conread position: 237-415
Cow position:
Alignm length: 181
Alignm identity: 148
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 148, 130

Conread position: 238-412
Cow position:
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 94

Conread position: 239-409
Cow position:
Alignm length: 175
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 43

Conread position: 239-413
Cow position:
Alignm length: 181
Alignm identity: 151
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 239-414
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 127

Conread position: 239-414
Cow position:
Alignm length: 180
Alignm identity: 153
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 85

Conread position: 239-414
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 239-414
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 76

Conread position: 239-414
Cow position:
Alignm length: 185
Alignm identity: 156
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 139, 100

Conread position: 239-414
Cow position:
Alignm length: 184
Alignm identity: 151
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 67

Conread position: 239-414
Cow position:
Alignm length: 177
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 38

Conread position: 240-414
Cow position:
Alignm length: 179
Alignm identity: 153
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 109

Conread position: 241-414
Cow position:
Alignm length: 176
Alignm identity: 145
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 145, 27

Conread position: 242-410
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 59

Conread position: 242-414
Cow position:
Alignm length: 179
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 97

Conread position: 242-414
Cow position:
Alignm length: 177
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 91

Conread position: 243-414
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 110

Conread position: 247-414
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 30

Conread position: 249-413
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 15, 94

Conread position: 250-414
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 23

Conread position: 251-414
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 43

Conread position: 252-412
Cow position:
Alignm length: 165
Alignm identity: 136
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 89

Conread position: 253-412
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 62

Conread position: 254-414
Cow position:
Alignm length: 168
Alignm identity: 134
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 256-414
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 257-414
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 260-412
Cow position:
Alignm length: 159
Alignm identity: 138
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 8

Conread position: 262-414
Cow position:
Alignm length: 162
Alignm identity: 132
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 262-414
Cow position:
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 89

Conread position: 263-414
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 59

Conread position: 264-414
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 267-414
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 268-414
Cow position:
Alignm length: 148
Alignm identity: 125
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 274-414
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 274-414
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 20

Conread position: 276-412
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 280-414
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 72

Conread position: 281-414
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 281-414
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 282-414
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 285-415
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 288-414
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 51

Conread position: 288-414
Cow position:
Alignm length: 133
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 291-412
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 102, 31

Conread position: 292-412
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 292-414
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 294-414
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 295-414
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 296-414
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 41

Conread position: 296-414
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 72

Conread position: 298-414
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 54

Conread position: 302-414
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 319-414
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.