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Cow genome map

           
Conread name:
           
rtra08_o16r1.y1
        

               
Conread position:
               
178-415
               

               
Cow position:
               
chr21:15445336-15445089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
183-413
               

               
Cow position:
               
chr21:20106999-20106771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
190-414
               

               
Cow position:
               
chr21:17434562-17434335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
193-414
               

               
Cow position:
               
chr21:17174899-17175134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr21:34254508-34254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr21:11706976-11706764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr21:12153907-12154120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr21:33729207-33729417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr21:43357487-43357277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
208-413
               

               
Cow position:
               
chr21:4189608-4189818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:4282089-4281888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:4905193-4904983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:7564548-7564334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:18494749-18494952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:19196394-19196179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:20925732-20925523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:22719006-22718795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:26648230-26648020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:27341820-27341616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:27743515-27743730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:28429224-28429426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:32535750-32535958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 160
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:36163189-36162977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:39401374-39401577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 64
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:42023909-42024105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:42190393-42190192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:42913972-42913762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:43240632-43240850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:45151857-45151636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:45866710-45866915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
208-415
               

               
Cow position:
               
chr21:5649680-5649892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
209-395
               

               
Cow position:
               
chr21:28907877-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr21:3585581-3585385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr21:23322306-23322097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
209-412
               

               
Cow position:
               
chr21:937827-938015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
171, 14
               

               
Conread position:
               
209-412
               

               
Cow position:
               
chr21:42348903-42348693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
209-413
               

               
Cow position:
               
chr21:8985324-8985529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
209-413
               

               
Cow position:
               
chr21:21480404-21480198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:81845-82062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:4080129-4080342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:4399575-4399786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:5344436-5344641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:5566766-5566983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:5636946-5636735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:6833827-6834033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
59, 129
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:7132687-7132478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 160
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:9416017-9416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:13703912-13703701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:13751163-13751370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:13763400-13763604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:18932267-18932471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:21223059-21223276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:25344653-25344855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
171, 117
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:28881924-28882118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:33419940-33419738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:33562789-33562997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:34010615-34010414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 113
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:38900548-38900761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:41155637-41155846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:47802487-47802274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr21:48484665-48484464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
209-416
               

               
Cow position:
               
chr21:17643188-17642979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
209-417
               

               
Cow position:
               
chr21:28734137-28733928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
210-412
               

               
Cow position:
               
chr21:44252052-44251854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
31, 142
               

               
Conread position:
               
210-412
               

               
Cow position:
               
chr21:46912320-46912521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr21:14760360-14760556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr21:16188020-16187826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 32
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:1464009-1464214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 35
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:3236308-3236505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:10151571-10151778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 148
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:13128318-13128113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:24607161-24607374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:28512309-28512512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:31159030-31159246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr21:34391194-34390992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
211-412
               

               
Cow position:
               
chr21:912191-911986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
211-414
               

               
Cow position:
               
chr21:17714090-17714300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
211-414
               

               
Cow position:
               
chr21:24222764-24222555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
211-414
               

               
Cow position:
               
chr21:39403761-39403553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr21:44108787-44108988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
212-414
               

               
Cow position:
               
chr21:363433-363633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
212-414
               

               
Cow position:
               
chr21:24797473-24797670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
212-414
               

               
Cow position:
               
chr21:33997447-33997244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
212-414
               

               
Cow position:
               
chr21:34658812-34659017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
212-414
               

               
Cow position:
               
chr21:35897842-35897649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
213-414
               

               
Cow position:
               
chr21:10727060-10727260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
174, 130
               

               
Conread position:
               
215-412
               

               
Cow position:
               
chr21:8126015-8125816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
215-414
               

               
Cow position:
               
chr21:18935542-18935744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr21:19083822-19083612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chr21:31676284-31676483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr21:2679335-2679538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
221-412
               

               
Cow position:
               
chr21:25127395-25127585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
221-414
               

               
Cow position:
               
chr21:13303606-13303803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
221-414
               

               
Cow position:
               
chr21:15584616-15584437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 47
               

               
Conread position:
               
221-414
               

               
Cow position:
               
chr21:42384292-42384493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
221-414
               

               
Cow position:
               
chr21:48262920-48263105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
227-405
               

               
Cow position:
               
chr21:35897281-35897456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
229-414
               

               
Cow position:
               
chr21:32237092-32237278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
230-414
               

               
Cow position:
               
chr21:49352998-49353185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
232-412
               

               
Cow position:
               
chr21:27521527-27521350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
148, 36
               

               
Conread position:
               
232-414
               

               
Cow position:
               
chr21:3381283-3381100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 117
               

               
Conread position:
               
232-414
               

               
Cow position:
               
chr21:3818014-3818193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
232-414
               

               
Cow position:
               
chr21:8618072-8618260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
232-414
               

               
Cow position:
               
chr21:12961101-12960916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
232-414
               

               
Cow position:
               
chr21:37361676-37361493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
232-414
               

               
Cow position:
               
chr21:40133953-40134143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
233-414
               

               
Cow position:
               
chr21:41579550-41579739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
233-414
               

               
Cow position:
               
chr21:41597614-41597804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
234-414
               

               
Cow position:
               
chr21:32339935-32339754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
234-414
               

               
Cow position:
               
chr21:35569584-35569398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
236-413
               

               
Cow position:
               
chr21:23586678-23586862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
236-414
               

               
Cow position:
               
chr21:3361212-3361030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
98, 130
               

               
Conread position:
               
236-414
               

               
Cow position:
               
chr21:4276792-4276607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 166
               

               
Conread position:
               
236-414
               

               
Cow position:
               
chr21:22860804-22860982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
237-413
               

               
Cow position:
               
chr21:13850268-13850083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
238-413
               

               
Cow position:
               
chr21:38449648-38449465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
239-412
               

               
Cow position:
               
chr21:13585253-13585088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
145, 33
               

               
Conread position:
               
239-413
               

               
Cow position:
               
chr21:24765089-24765272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
239-413
               

               
Cow position:
               
chr21:25382814-25382996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:2785971-2785793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:5238200-5238369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:6051311-6051490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:21077134-21077309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:28955327-28955491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:34835618-34835451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr21:45330803-45330618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
240-412
               

               
Cow position:
               
chr21:31277627-31277803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
240-414
               

               
Cow position:
               
chr21:31253341-31253527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
241-414
               

               
Cow position:
               
chr21:10118360-10118542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
241-414
               

               
Cow position:
               
chr21:13163700-13163874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
241-417
               

               
Cow position:
               
chr21:3763930-3763753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
243-414
               

               
Cow position:
               
chr21:32559545-32559376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
243-414
               

               
Cow position:
               
chr21:40065506-40065331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
245-414
               

               
Cow position:
               
chr21:6102458-6102277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
246-414
               

               
Cow position:
               
chr21:13365153-13365321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
246-414
               

               
Cow position:
               
chr21:17193948-17193770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
246-414
               

               
Cow position:
               
chr21:18850407-18850245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
246-414
               

               
Cow position:
               
chr21:47764300-47764132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
138, 105
               

               
Conread position:
               
247-412
               

               
Cow position:
               
chr21:9998908-9998736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
247-414
               

               
Cow position:
               
chr21:4268686-4268859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
247-414
               

               
Cow position:
               
chr21:18845202-18845032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
247-418
               

               
Cow position:
               
chr21:28027616-28027794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
248-414
               

               
Cow position:
               
chr21:46973313-46973150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
249-414
               

               
Cow position:
               
chr21:30607273-30607106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
252-414
               

               
Cow position:
               
chr21:13488337-13488505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
252-414
               

               
Cow position:
               
chr21:46829451-46829287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
253-412
               

               
Cow position:
               
chr21:9990333-9990497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
253-414
               

               
Cow position:
               
chr21:39450349-39450180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
254-414
               

               
Cow position:
               
chr21:17183741-17183906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
256-414
               

               
Cow position:
               
chr21:8235722-8235571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
257-414
               

               
Cow position:
               
chr21:18790733-18790576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
259-414
               

               
Cow position:
               
chr21:41198586-41198421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
261-414
               

               
Cow position:
               
chr21:22194283-22194129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
262-414
               

               
Cow position:
               
chr21:9872796-9872940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
262-414
               

               
Cow position:
               
chr21:27146163-27146006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
262-414
               

               
Cow position:
               
chr21:28810434-28810277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
263-414
               

               
Cow position:
               
chr21:712764-712910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
264-414
               

               
Cow position:
               
chr21:21169664-21169509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
265-414
               

               
Cow position:
               
chr21:10000912-10001058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
265-414
               

               
Cow position:
               
chr21:23311113-23310960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr21:28244310-28244452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
267-415
               

               
Cow position:
               
chr21:6765714-6765864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
269-414
               

               
Cow position:
               
chr21:10114493-10114350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
272-414
               

               
Cow position:
               
chr21:28617429-28617572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
273-414
               

               
Cow position:
               
chr21:31511132-31511269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
274-414
               

               
Cow position:
               
chr21:18800688-18800546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
276-411
               

               
Cow position:
               
chr21:43631360-43631219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
276-414
               

               
Cow position:
               
chr21:13840165-13840308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
278-414
               

               
Cow position:
               
chr21:10633796-10633657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
279-414
               

               
Cow position:
               
chr21:10608609-10608469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
279-414
               

               
Cow position:
               
chr21:24642364-24642503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
279-414
               

               
Cow position:
               
chr21:26244777-26244903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
281-412
               

               
Cow position:
               
chr21:11456962-11456829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
285-412
               

               
Cow position:
               
chr21:32138789-32138921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
285-414
               

               
Cow position:
               
chr21:36765930-36765801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
288-414
               

               
Cow position:
               
chr21:10005031-10004904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
295-414
               

               
Cow position:
               
chr21:12462109-12461987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
296-414
               

               
Cow position:
               
chr21:20152810-20152937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
297-414
               

               
Cow position:
               
chr21:17875332-17875208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
303-414
               

               
Cow position:
               
chr21:34151450-34151567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               
Show alignments to all cow chromosomes.