Cow genome map


           Conread name:
           rtra08_o16r1.y1
        

               Conread position:
               208-412
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               208-412
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               177, 47
               

               Conread position:
               208-413
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 63
               

               Conread position:
               208-413
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               175, 51
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 124
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 128
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 46
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               175, 46
               

               Conread position:
               208-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 94
               

               Conread position:
               209-407
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               209-408
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               209-408
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               176, 14
               

               Conread position:
               209-410
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 61
               

               Conread position:
               209-413
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               25, 148
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 57
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               175, 54
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 39
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               61, 131
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 79
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 8
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               209-414
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               209-415
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               209-416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               209-417
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               210-414
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               210-414
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               210-414
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               210-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 159
               

               Conread position:
               210-414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               210-414
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 141
               

               Conread position:
               211-412
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               58, 139
               

               Conread position:
               211-414
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               214-413
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               117, 112
               

               Conread position:
               214-414
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               215-414
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               217-412
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               217-414
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               142, 43
               

               Conread position:
               218-414
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               221-414
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 46
               

               Conread position:
               223-412
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               223-414
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               161, 45
               

               Conread position:
               225-413
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               160
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               5, 46
               

               Conread position:
               226-414
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               232-414
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               232-414
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               232-414
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               155, 35
               

               Conread position:
               233-413
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               233-414
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 143
               

               Conread position:
               235-413
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 135
               

               Conread position:
               235-414
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 88
               

               Conread position:
               236-414
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               237-414
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               148, 92
               

               Conread position:
               237-414
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               239-412
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               239-414
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               239-414
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 112
               

               Conread position:
               240-414
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               241-413
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               241-414
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               245-414
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               246-414
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               246-418
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               248-413
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               251-412
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               251-414
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               129, 71
               

               Conread position:
               251-414
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               254-414
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               255-414
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               255-414
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               260-414
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               261-414
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               262-412
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               262-413
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               269-413
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               100, 9
               

               Conread position:
               271-413
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               273-413
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               282-412
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               283-414
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               285-414
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               285-414
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               291-415
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               292-414
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 89
               

               Conread position:
               293-414
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               295-414
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               296-412
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               298-414
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               301-415
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               321-414
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.