Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 186-414
Cow position:
Alignm length: 240
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 35

Conread position: 186-414
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 191-414
Cow position:
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 192-411
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 10

Conread position: 192-414
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 10

Conread position: 208-405
Cow position:
Alignm length: 202
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 116

Conread position: 208-410
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-412
Cow position:
Alignm length: 208
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 75

Conread position: 208-412
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-412
Cow position:
Alignm length: 208
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 160

Conread position: 208-413
Cow position:
Alignm length: 209
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 208-413
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 208-414
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 0

Conread position: 208-414
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 93

Conread position: 208-414
Cow position:
Alignm length: 219
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 208-414
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 177, 31

Conread position: 208-414
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 15

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 25

Conread position: 208-414
Cow position:
Alignm length: 216
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 208-414
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 146

Conread position: 208-414
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 174, 22

Conread position: 208-414
Cow position:
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-415
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 208-418
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 111

Conread position: 209-411
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 209-413
Cow position:
Alignm length: 220
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 88

Conread position: 209-413
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 145

Conread position: 209-414
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 105

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 108

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 56, 123

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 150

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 129

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 178, 43

Conread position: 209-414
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 156

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 53, 123

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 32

Conread position: 209-414
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 32

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 59

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 209-414
Cow position:
Alignm length: 214
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 7

Conread position: 209-414
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 174, 130

Conread position: 209-415
Cow position:
Alignm length: 211
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-417
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 210-399
Cow position:
Alignm length: 197
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 150

Conread position: 210-413
Cow position:
Alignm length: 205
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 69

Conread position: 210-414
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 210-414
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 210-414
Cow position:
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 210-417
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 71

Conread position: 211-414
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 128

Conread position: 211-415
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 186

Conread position: 214-414
Cow position:
Alignm length: 205
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 46

Conread position: 214-414
Cow position:
Alignm length: 204
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 215-414
Cow position:
Alignm length: 206
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 111

Conread position: 217-414
Cow position:
Alignm length: 203
Alignm identity: 163
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 46, 126

Conread position: 218-414
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 30

Conread position: 220-412
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 120

Conread position: 220-413
Cow position:
Alignm length: 195
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 107

Conread position: 221-413
Cow position:
Alignm length: 195
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 164, 15

Conread position: 221-414
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 60

Conread position: 221-414
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 50

Conread position: 221-414
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 108

Conread position: 221-414
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 91

Conread position: 222-414
Cow position:
Alignm length: 195
Alignm identity: 155
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 162, 84

Conread position: 224-414
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 11

Conread position: 224-414
Cow position:
Alignm length: 196
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 6, 18

Conread position: 225-414
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 17

Conread position: 229-414
Cow position:
Alignm length: 189
Alignm identity: 153
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 155, 87

Conread position: 231-414
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 231-414
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 115

Conread position: 232-414
Cow position:
Alignm length: 187
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 98

Conread position: 233-412
Cow position:
Alignm length: 183
Alignm identity: 147
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 99

Conread position: 233-412
Cow position:
Alignm length: 183
Alignm identity: 147
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 151, 98

Conread position: 233-413
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 8

Conread position: 235-414
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 33

Conread position: 235-414
Cow position:
Alignm length: 184
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 236-414
Cow position:
Alignm length: 183
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 236-414
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 32, 118

Conread position: 236-414
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 95

Conread position: 236-414
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 87

Conread position: 236-417
Cow position:
Alignm length: 193
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 237-414
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 91

Conread position: 237-414
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 86

Conread position: 237-414
Cow position:
Alignm length: 185
Alignm identity: 151
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 143, 31

Conread position: 239-412
Cow position:
Alignm length: 188
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 239-414
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 164

Conread position: 239-414
Cow position:
Alignm length: 186
Alignm identity: 152
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 56

Conread position: 239-414
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 141, 94

Conread position: 240-414
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 83

Conread position: 240-414
Cow position:
Alignm length: 184
Alignm identity: 150
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 240-418
Cow position:
Alignm length: 180
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 94

Conread position: 241-414
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 80

Conread position: 241-414
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 65

Conread position: 241-414
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 242-414
Cow position:
Alignm length: 179
Alignm identity: 148
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 243-412
Cow position:
Alignm length: 174
Alignm identity: 143
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 110

Conread position: 244-414
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 10

Conread position: 246-410
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 76

Conread position: 246-413
Cow position:
Alignm length: 177
Alignm identity: 148
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 43

Conread position: 246-414
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 94

Conread position: 246-414
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 112

Conread position: 248-414
Cow position:
Alignm length: 171
Alignm identity: 144
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 20, 25

Conread position: 252-414
Cow position:
Alignm length: 167
Alignm identity: 136
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 119, 79

Conread position: 254-414
Cow position:
Alignm length: 167
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 25

Conread position: 256-415
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 104

Conread position: 263-414
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 118, 62

Conread position: 273-414
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 111, 0

Conread position: 279-414
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 283-414
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 56

Conread position: 285-414
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 285-414
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 70

Conread position: 285-414
Cow position:
Alignm length: 136
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 70

Conread position: 287-414
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 62

Conread position: 290-414
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 294-414
Cow position:
Alignm length: 125
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 295-412
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 57

Conread position: 295-414
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 47

Conread position: 304-414
Cow position:
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 306-414
Cow position:
Alignm length: 111
Alignm identity: 95
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 310-413
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 313-414
Cow position:
Alignm length: 104
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.