Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 187-414
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 57

Conread position: 207-408
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 143, 0

Conread position: 208-411
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 13

Conread position: 208-414
Cow position:
Alignm length: 208
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 15

Conread position: 208-414
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 61, 15

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 98

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 79

Conread position: 208-414
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 64

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 172, 60

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 61, 15

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-415
Cow position:
Alignm length: 225
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 56, 10

Conread position: 209-412
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-412
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 209-413
Cow position:
Alignm length: 214
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 209-413
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 27

Conread position: 209-413
Cow position:
Alignm length: 208
Alignm identity: 169
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 32

Conread position: 209-413
Cow position:
Alignm length: 209
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 78

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 143

Conread position: 209-414
Cow position:
Alignm length: 214
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 209-414
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 95

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 74

Conread position: 209-415
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 210-414
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 123

Conread position: 211-412
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 19

Conread position: 211-414
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 88

Conread position: 211-414
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 174, 57

Conread position: 211-415
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 178

Conread position: 212-414
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 212-414
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 215-412
Cow position:
Alignm length: 203
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 217-413
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 170, 42

Conread position: 217-414
Cow position:
Alignm length: 201
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 218-414
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 150

Conread position: 219-414
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 59

Conread position: 221-410
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 132

Conread position: 221-414
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 100

Conread position: 222-414
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 99, 46

Conread position: 223-413
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 110, 18

Conread position: 225-414
Cow position:
Alignm length: 196
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 227-414
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 9

Conread position: 230-414
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 103

Conread position: 232-412
Cow position:
Alignm length: 186
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 46

Conread position: 232-414
Cow position:
Alignm length: 186
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 114

Conread position: 232-414
Cow position:
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 120

Conread position: 232-414
Cow position:
Alignm length: 185
Alignm identity: 148
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 151, 107

Conread position: 233-412
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 68

Conread position: 233-414
Cow position:
Alignm length: 197
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 236-412
Cow position:
Alignm length: 189
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 237-414
Cow position:
Alignm length: 181
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 40

Conread position: 239-414
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 143

Conread position: 241-414
Cow position:
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 94

Conread position: 241-414
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 69

Conread position: 241-414
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 242-414
Cow position:
Alignm length: 178
Alignm identity: 143
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 21, 74

Conread position: 242-414
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 74

Conread position: 242-414
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 173

Conread position: 243-412
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 38

Conread position: 243-414
Cow position:
Alignm length: 177
Alignm identity: 142
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 96, 77

Conread position: 243-414
Cow position:
Alignm length: 176
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 113

Conread position: 246-414
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 135, 22

Conread position: 249-413
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 36

Conread position: 251-414
Cow position:
Alignm length: 168
Alignm identity: 140
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 104

Conread position: 252-414
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 25

Conread position: 253-410
Cow position:
Alignm length: 166
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 108

Conread position: 258-414
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 122, 68

Conread position: 258-414
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 262-414
Cow position:
Alignm length: 155
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 77

Conread position: 264-414
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 265-414
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 268-412
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 272-414
Cow position:
Alignm length: 147
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 80

Conread position: 292-414
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 299-414
Cow position:
Alignm length: 119
Alignm identity: 104
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 303-414
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 303-414
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 23

Show alignments to all cow chromosomes.