Cow genome map
| Conread name: | rtra08_o16r1.y1 |
| Conread position: | 187-414 |
| Cow position: | chr26:2531469-2531244 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 207-408 |
| Cow position: | chr26:4363031-4363235 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 208-411 |
| Cow position: | chr26:3072235-3072032 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 208-414 |
| Cow position: | chr26:6188023-6188230 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 208-414 |
| Cow position: | chr26:7642850-7642638 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 208-414 |
| Cow position: | chr26:14174023-14174239 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 208-414 |
| Cow position: | chr26:16549710-16549921 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 208-414 |
| Cow position: | chr26:19459402-19459621 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 208-414 |
| Cow position: | chr26:20256572-20256778 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 208-414 |
| Cow position: | chr26:21912515-21912726 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 208-414 |
| Cow position: | chr26:27063943-27063733 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 64 |
| Conread position: | 208-414 |
| Cow position: | chr26:28442278-28442070 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 172, 60 |
| Conread position: | 208-414 |
| Cow position: | chr26:29576117-29576326 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 208-414 |
| Cow position: | chr26:31701542-31701758 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 208-415 |
| Cow position: | chr26:20182490-20182711 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 209-412 |
| Cow position: | chr26:20291954-20291748 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 209-412 |
| Cow position: | chr26:32682842-32683053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 209-413 |
| Cow position: | chr26:6447879-6447666 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 209-413 |
| Cow position: | chr26:16796502-16796295 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 209-413 |
| Cow position: | chr26:23926249-23926051 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 209-413 |
| Cow position: | chr26:26671014-26670811 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 209-414 |
| Cow position: | chr26:6714555-6714357 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 209-414 |
| Cow position: | chr26:13270950-13270737 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 209-414 |
| Cow position: | chr26:16167182-16166977 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 209-414 |
| Cow position: | chr26:32776778-32776571 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 209-414 |
| Cow position: | chr26:34108499-34108699 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 209-415 |
| Cow position: | chr26:25393760-25393968 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 210-414 |
| Cow position: | chr26:32013359-32013564 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 211-412 |
| Cow position: | chr26:34738413-34738210 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 211-414 |
| Cow position: | chr26:11134966-11134759 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 211-414 |
| Cow position: | chr26:33567311-33567109 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 174, 57 |
| Conread position: | 211-415 |
| Cow position: | chr26:14951422-14951209 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 178 |
| Conread position: | 212-414 |
| Cow position: | chr26:25737202-25737410 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 212-414 |
| Cow position: | chr26:30806781-30806569 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 215-412 |
| Cow position: | chr26:30752130-30751928 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 217-413 |
| Cow position: | chr26:31856445-31856641 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 217-414 |
| Cow position: | chr26:7525732-7525532 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 218-414 |
| Cow position: | chr26:32553418-32553616 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 219-414 |
| Cow position: | chr26:20260327-20260516 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 221-410 |
| Cow position: | chr26:20059264-20059453 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 221-414 |
| Cow position: | chr26:12155371-12155181 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 222-414 |
| Cow position: | chr26:32026619-32026430 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 223-413 |
| Cow position: | chr26:7148555-7148354 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 225-414 |
| Cow position: | chr26:6793684-6793879 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 227-414 |
| Cow position: | chr26:34314424-34314626 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 125, 9 |
| Conread position: | 230-414 |
| Cow position: | chr26:28243871-28243681 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 103 |
| Conread position: | 232-412 |
| Cow position: | chr26:23097427-23097243 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 232-414 |
| Cow position: | chr26:8810883-8811066 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 232-414 |
| Cow position: | chr26:9104530-9104343 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 232-414 |
| Cow position: | chr26:9867363-9867181 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 151, 107 |
| Conread position: | 233-412 |
| Cow position: | chr26:29332852-29333027 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 233-414 |
| Cow position: | chr26:6793891-6794087 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 236-412 |
| Cow position: | chr26:8746080-8745892 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 237-414 |
| Cow position: | chr26:27594399-27594568 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 239-414 |
| Cow position: | chr26:9604310-9604495 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 143 |
| Conread position: | 241-414 |
| Cow position: | chr26:613913-613742 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 241-414 |
| Cow position: | chr26:10768140-10767975 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 143, 69 |
| Conread position: | 241-414 |
| Cow position: | chr26:35357355-35357536 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 242-414 |
| Cow position: | chr26:9850332-9850163 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 242-414 |
| Cow position: | chr26:9853842-9853673 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 242-414 |
| Cow position: | chr26:31061961-31062137 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 173 |
| Conread position: | 243-412 |
| Cow position: | chr26:14958252-14958079 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 243-414 |
| Cow position: | chr26:21351450-21351625 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 96, 77 |
| Conread position: | 243-414 |
| Cow position: | chr26:30034643-30034470 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 145 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 246-414 |
| Cow position: | chr26:14292932-14293099 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 135, 22 |
| Conread position: | 249-413 |
| Cow position: | chr26:5361188-5361034 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 251-414 |
| Cow position: | chr26:21242874-21243038 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 133, 104 |
| Conread position: | 252-414 |
| Cow position: | chr26:26200616-26200780 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 253-410 |
| Cow position: | chr26:19774531-19774369 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 108 |
| Conread position: | 258-414 |
| Cow position: | chr26:15200739-15200577 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 258-414 |
| Cow position: | chr26:23001268-23001102 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 262-414 |
| Cow position: | chr26:5988939-5988790 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 264-414 |
| Cow position: | chr26:33857414-33857256 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 265-414 |
| Cow position: | chr26:8186435-8186588 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 268-412 |
| Cow position: | chr26:10764007-10764155 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 272-414 |
| Cow position: | chr26:25526038-25526183 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 292-414 |
| Cow position: | chr26:6252659-6252788 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 299-414 |
| Cow position: | chr26:27761830-27761712 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 303-414 |
| Cow position: | chr26:22354236-22354350 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 303-414 |
| Cow position: | chr26:30568833-30568721 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 23 |
Show alignments to all cow chromosomes.