Cow genome map

Conread name: rtra08_o16r1.y1

Conread position: 176-414
Cow position:
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 28

Conread position: 208-412
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 208-412
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 64

Conread position: 208-413
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 145

Conread position: 208-413
Cow position:
Alignm length: 210
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 23

Conread position: 208-413
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 208-413
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 208-414
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 116

Conread position: 208-414
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 208-414
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 66

Conread position: 208-414
Cow position:
Alignm length: 216
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 160

Conread position: 208-414
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 208-417
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 47

Conread position: 209-410
Cow position:
Alignm length: 207
Alignm identity: 166
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 61, 150

Conread position: 209-410
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 34

Conread position: 209-412
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 78

Conread position: 209-412
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 24

Conread position: 209-412
Cow position:
Alignm length: 207
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 134

Conread position: 209-412
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 53, 9

Conread position: 209-413
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 54

Conread position: 209-413
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 128

Conread position: 209-413
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 128, 0

Conread position: 209-413
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 147

Conread position: 209-413
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 135

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 148, 14

Conread position: 209-414
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 21

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 55, 21

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 165

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 45

Conread position: 209-414
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 70, 59

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 71, 11

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 58, 16

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 36

Conread position: 209-414
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 123

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 98, 41

Conread position: 209-414
Cow position:
Alignm length: 214
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 209-414
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 144, 0

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 209-414
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 119

Conread position: 209-414
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 106, 17

Conread position: 209-414
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 66

Conread position: 209-414
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 63

Conread position: 210-412
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 150

Conread position: 210-412
Cow position:
Alignm length: 207
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 84

Conread position: 210-414
Cow position:
Alignm length: 208
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 143

Conread position: 210-414
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 31

Conread position: 210-414
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 141, 58

Conread position: 211-414
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 212-414
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 179

Conread position: 214-414
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 27

Conread position: 215-414
Cow position:
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 156

Conread position: 215-414
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 174

Conread position: 217-414
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 220-414
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 221-412
Cow position:
Alignm length: 198
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 221-414
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 135

Conread position: 221-414
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 221-414
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 158

Conread position: 221-414
Cow position:
Alignm length: 200
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 139

Conread position: 222-413
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 131

Conread position: 223-412
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 69

Conread position: 225-413
Cow position:
Alignm length: 196
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 19

Conread position: 226-414
Cow position:
Alignm length: 194
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 227-414
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 27

Conread position: 228-414
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 137, 43

Conread position: 230-414
Cow position:
Alignm length: 195
Alignm identity: 162
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 6, 42

Conread position: 231-414
Cow position:
Alignm length: 191
Alignm identity: 151
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 232-413
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 17

Conread position: 232-414
Cow position:
Alignm length: 186
Alignm identity: 154
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 152, 88

Conread position: 232-414
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 233-412
Cow position:
Alignm length: 187
Alignm identity: 154
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 54

Conread position: 235-414
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 126

Conread position: 235-414
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 126

Conread position: 236-414
Cow position:
Alignm length: 182
Alignm identity: 148
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 147, 0

Conread position: 237-411
Cow position:
Alignm length: 179
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 15

Conread position: 237-414
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 237-414
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 237-417
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 137

Conread position: 238-414
Cow position:
Alignm length: 179
Alignm identity: 144
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 148, 30

Conread position: 238-414
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 57

Conread position: 239-414
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 239-414
Cow position:
Alignm length: 187
Alignm identity: 151
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 100, 0

Conread position: 239-414
Cow position:
Alignm length: 179
Alignm identity: 147
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 116

Conread position: 239-414
Cow position:
Alignm length: 180
Alignm identity: 145
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 32, 53

Conread position: 239-414
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 103

Conread position: 240-414
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 100

Conread position: 241-405
Cow position:
Alignm length: 168
Alignm identity: 142
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 143, 116

Conread position: 241-414
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 114

Conread position: 241-414
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 100

Conread position: 242-414
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 119

Conread position: 243-414
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 52

Conread position: 245-414
Cow position:
Alignm length: 173
Alignm identity: 140
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 139, 10

Conread position: 248-414
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 28

Conread position: 249-414
Cow position:
Alignm length: 169
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 78

Conread position: 250-414
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 251-411
Cow position:
Alignm length: 166
Alignm identity: 147
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 108

Conread position: 251-413
Cow position:
Alignm length: 166
Alignm identity: 138
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 89

Conread position: 252-413
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 107

Conread position: 252-414
Cow position:
Alignm length: 164
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 78

Conread position: 255-414
Cow position:
Alignm length: 170
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 22

Conread position: 256-413
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 97

Conread position: 256-414
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 41

Conread position: 256-414
Cow position:
Alignm length: 161
Alignm identity: 132
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 82

Conread position: 257-414
Cow position:
Alignm length: 163
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 61

Conread position: 260-414
Cow position:
Alignm length: 157
Alignm identity: 130
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 75

Conread position: 261-411
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 117

Conread position: 262-414
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 38

Conread position: 263-412
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 25

Conread position: 263-414
Cow position:
Alignm length: 157
Alignm identity: 136
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 0

Conread position: 264-414
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 265-407
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 115, 70

Conread position: 268-414
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 271-414
Cow position:
Alignm length: 144
Alignm identity: 121
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 279-414
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 282-413
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 285-414
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 288-414
Cow position:
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 288-414
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 8

Conread position: 290-414
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 291-414
Cow position:
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 293-413
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 69

Conread position: 294-415
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 296-414
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 28

Conread position: 298-413
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 44

Conread position: 299-415
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 39

Conread position: 300-414
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 313-415
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 22

Show alignments to all cow chromosomes.