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Cow genome map

           
Conread name:
           
rtra13_j5r1.y1
        

               
Conread position:
               
68-288
               

               
Cow position:
               
chr1:46838617-46838850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
101-288
               

               
Cow position:
               
chr1:6164821-6165018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
103-288
               

               
Cow position:
               
chr1:81357782-81357592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr1:30065239-30065433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr1:21133000-21132808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr1:21677672-21677856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 66
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr1:23969945-23969753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr1:29704781-29704591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr1:41517967-41517778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr1:99016160-99015969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
106-287
               

               
Cow position:
               
chr1:76861192-76861003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
106-288
               

               
Cow position:
               
chr1:88389199-88389383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
106-288
               

               
Cow position:
               
chr1:100451799-100451612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
108-284
               

               
Cow position:
               
chr1:61140309-61140491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr1:66490447-66490637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
109-285
               

               
Cow position:
               
chr1:32565061-32564875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-286
               

               
Cow position:
               
chr1:3383448-3383264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-286
               

               
Cow position:
               
chr1:89186574-89186394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr1:76872748-76872936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:4209047-4208858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:5504805-5504993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:6197409-6197221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:6212106-6212296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:8556552-8556741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:8745364-8745553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:8827886-8828076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:9263239-9263050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:10725489-10725679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:11289739-11289550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:11666696-11666507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:12058652-12058465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:13251653-13251461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:13405519-13405330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:14361605-14361416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:17436809-17436619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:18487311-18487122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:20648306-20648495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:20831751-20831937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:20847139-20846958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:21377692-21377503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:21995145-21994957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:22222890-22223079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:22529932-22529747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:25552673-25552862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:26587817-26588006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:26812206-26812017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:28875958-28876147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:29037408-29037597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:29365274-29365463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:30103711-30103522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:31351895-31351711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:32961637-32961445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:33040167-33039977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:33548533-33548339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:33854148-33854337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:33899133-33899322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:35598938-35598755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:38478171-38478360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:38711579-38711767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:40681864-40681676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:42739279-42739462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:46613426-46613237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:52171943-52171754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:55274171-55273987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:57363462-57363277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:57570704-57570886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:58171606-58171795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:58339797-58339977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:59203397-59203208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:60251560-60251371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:60341917-60342106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:63045751-63045940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:63341603-63341417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:65389425-65389614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:66972291-66972102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:67001076-67001265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:67005747-67005936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:67832270-67832081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:69406024-69406213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:70069531-70069720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:71559878-71559689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:71794399-71794588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:72086462-72086651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:72767160-72766968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:73434459-73434270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:76618607-76618418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:76877898-76878087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:79335313-79335123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:79454100-79453911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:79553363-79553550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:81301984-81302170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:82478851-82479040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:82909964-82909774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:82921283-82921094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:83170506-83170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:85777593-85777404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:85794823-85795012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:86545270-86545082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:87722821-87722632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:89090672-89090481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:89111699-89111887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:89431269-89431458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:90912695-90912884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:91673098-91673287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:91901885-91902074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:92034967-92035153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:93857389-93857578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr1:102551878-102552067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
111-288
               

               
Cow position:
               
chr1:52755663-52755477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr1:88178728-88178913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr1:28812371-28812189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr1:31191542-31191361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr1:53422772-53422951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:7196348-7196164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:16798223-16798039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:21090321-21090505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:21458568-21458747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:23658297-23658481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:30078817-30078998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:31597080-31597264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:34532920-34533104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:49267754-49267938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:61340449-61340265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:67289283-67289466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:68275378-68275558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:69504500-69504319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:70863908-70864094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:72986332-72986513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:73064464-73064280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:76849909-76849725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:78922139-78921958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:86506754-86506570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:86600144-86599960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:86705022-86705207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 51
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr1:101011042-101010860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr1:21576420-21576603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr1:22481788-22481605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr1:42054657-42054472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr1:11199755-11199576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr1:17938872-17938697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 43
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr1:29608225-29608044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr1:56141477-56141298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr1:102431863-102431684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
119-288
               

               
Cow position:
               
chr1:39889016-39889194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
119-288
               

               
Cow position:
               
chr1:48345062-48345240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr1:9261393-9261567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr1:19236615-19236442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
128-287
               

               
Cow position:
               
chr1:57635936-57635766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
130-288
               

               
Cow position:
               
chr1:68602741-68602575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
134-288
               

               
Cow position:
               
chr1:24203755-24203594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
136-288
               

               
Cow position:
               
chr1:63048473-63048634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
145-288
               

               
Cow position:
               
chr1:7299928-7300079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
147-288
               

               
Cow position:
               
chr1:31106488-31106338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
148-288
               

               
Cow position:
               
chr1:15149737-15149588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
151-288
               

               
Cow position:
               
chr1:48811284-48811139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
156-288
               

               
Cow position:
               
chr1:18087343-18087484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
156-288
               

               
Cow position:
               
chr1:85630250-85630391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
159-286
               

               
Cow position:
               
chr1:69671704-69671568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
165-288
               

               
Cow position:
               
chr1:13438043-13438176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
169-288
               

               
Cow position:
               
chr1:56205884-56205755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
173-288
               

               
Cow position:
               
chr1:40058035-40058160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
178-288
               

               
Cow position:
               
chr1:83108674-83108555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
179-288
               

               
Cow position:
               
chr1:47118893-47119012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
180-288
               

               
Cow position:
               
chr1:67078887-67078769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               
Show alignments to all cow chromosomes.