Cow genome map

Conread name: rtra13_j5r1.y1

Conread position: 68-288
Cow position: chr10:17222223-17222452 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 47, 12

Conread position: 72-288
Cow position: chr10:14806791-14807016 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 8

Conread position: 105-288
Cow position: chr10:1972683-1972491 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 151, 58

Conread position: 105-288
Cow position: chr10:20111637-20111827 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 143, 31

Conread position: 105-288
Cow position: chr10:20381097-20380908 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 151, 59

Conread position: 105-288
Cow position: chr10:28528530-28528342 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 151, 59

Conread position: 105-288
Cow position: chr10:40105696-40105888 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 149, 59

Conread position: 105-288
Cow position: chr10:69936186-69935994 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 151, 59

Conread position: 106-288
Cow position: chr10:5785345-5785154 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 30

Conread position: 106-288
Cow position: chr10:16647420-16647229 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 58

Conread position: 106-288
Cow position: chr10:29106921-29106734 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 148, 53

Conread position: 108-288
Cow position: chr10:21737837-21737644 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 7, 60

Conread position: 109-288
Cow position: chr10:278459-278276 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 77

Conread position: 109-288
Cow position: chr10:325865-325678 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 25

Conread position: 109-288
Cow position: chr10:1380391-1380576 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:2117551-2117362 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:3817163-3817352 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:5857438-5857627 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:6221136-6221325 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:7279210-7279021 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:8293021-8293210 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:8681515-8681704 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:14332950-14332761 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:14970800-14970989 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:17959256-17959445 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:18106457-18106645 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 156
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:19141718-19141529 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 56

Conread position: 109-288
Cow position: chr10:19296513-19296324 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:19491884-19491697 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:21426412-21426223 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 56

Conread position: 109-288
Cow position: chr10:21729812-21729623 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:23848857-23849046 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:25004805-25004993 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:25563665-25563474 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 6, 37

Conread position: 109-288
Cow position: chr10:25632946-25632757 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:26923398-26923209 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:27004689-27004500 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:28031043-28030854 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 63

Conread position: 109-288
Cow position: chr10:30682598-30682412 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:31022163-31021975 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 21

Conread position: 109-288
Cow position: chr10:32008968-32009156 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr10:32086579-32086768 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:32364834-32365019 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 6, 51

Conread position: 109-288
Cow position: chr10:32581129-32581318 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:32699556-32699745 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:32703654-32703842 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 34

Conread position: 109-288
Cow position: chr10:34335606-34335417 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:36275285-36275096 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:37040896-37041085 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:37126323-37126137 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 147, 5

Conread position: 109-288
Cow position: chr10:37772770-37772959 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 55

Conread position: 109-288
Cow position: chr10:38817798-38817987 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:38843058-38843243 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:39441061-39441250 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:40347764-40347578 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 53

Conread position: 109-288
Cow position: chr10:40375898-40376087 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 55

Conread position: 109-288
Cow position: chr10:41140130-41139940 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 5, 57

Conread position: 109-288
Cow position: chr10:41160308-41160495 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 51

Conread position: 109-288
Cow position: chr10:46171305-46171492 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:48170412-48170601 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:48374554-48374365 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:51558291-51558480 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:52738748-52738937 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:52826736-52826547 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:55973888-55974077 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:57986803-57986617 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 18

Conread position: 109-288
Cow position: chr10:62405880-62405691 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:64305135-64304946 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr10:65308256-65308445 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr10:66773505-66773315 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 57

Conread position: 111-288
Cow position: chr10:40736581-40736767 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 143, 53

Conread position: 113-288
Cow position: chr10:1663071-1662887 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 145, 51

Conread position: 113-288
Cow position: chr10:2466995-2466811 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr10:2847783-2847967 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 51

Conread position: 113-288
Cow position: chr10:23411942-23412126 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr10:29629371-29629188 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 155
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 41

Conread position: 113-288
Cow position: chr10:31541545-31541728 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 50

Conread position: 113-288
Cow position: chr10:34664872-34664689 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr10:38542823-38542642 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 51

Conread position: 113-288
Cow position: chr10:38941017-38941199 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 16

Conread position: 113-288
Cow position: chr10:50017466-50017282 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr10:51837819-51837636 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr10:55010707-55010886 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 144, 24

Conread position: 113-288
Cow position: chr10:57554439-57554255 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 51

Conread position: 114-286
Cow position: chr10:37530905-37530723 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 51

Conread position: 115-288
Cow position: chr10:42744494-42744667 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 143, 49

Conread position: 118-288
Cow position: chr10:4641247-4641426 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 136, 46

Conread position: 118-288
Cow position: chr10:9682267-9682088 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 151
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 136, 46

Conread position: 118-288
Cow position: chr10:19514133-19514310 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 138, 46

Conread position: 118-288
Cow position: chr10:39038147-39037971 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 136, 43

Conread position: 119-288
Cow position: chr10:17492510-17492332 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 135, 45

Conread position: 120-288
Cow position: chr10:12101469-12101290 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 123-288
Cow position: chr10:19893957-19894123 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 47

Conread position: 127-286
Cow position: chr10:42461055-42460887 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 125, 47

Conread position: 128-288
Cow position: chr10:19330498-19330666 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 33

Conread position: 137-288
Cow position: chr10:66142404-66142564 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 119, 27

Conread position: 140-288
Cow position: chr10:1377570-1377413 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 24

Conread position: 140-288
Cow position: chr10:36879533-36879376 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 24

Conread position: 145-288
Cow position: chr10:23649648-23649496 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 19

Conread position: 146-287
Cow position: chr10:24750839-24750989 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 18

Conread position: 153-288
Cow position: chr10:48241622-48241477 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 155-288
Cow position: chr10:62775806-62775949 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 156-288
Cow position: chr10:26539968-26539829 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 8

Conread position: 178-288
Cow position: chr10:50451517-50451637 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 0

Show alignments to all cow chromosomes.