Cow genome map

Conread name: rtra13_j5r1.y1

Conread position: 72-288
Cow position: chr12:34176142-34176366 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 21

Conread position: 108-288
Cow position: chr12:21201622-21201816 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 57

Conread position: 109-286
Cow position: chr12:22480183-22479996 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:62395-62206 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:536756-536567 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:1437741-1437930 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:1469312-1469123 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:1511951-1511762 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:3717457-3717272 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 15

Conread position: 109-288
Cow position: chr12:5328096-5327908 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 46

Conread position: 109-288
Cow position: chr12:8675251-8675063 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:11101061-11101250 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 56

Conread position: 109-288
Cow position: chr12:12755342-12755153 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:14569002-14568813 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:15539611-15539800 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:17718114-17718302 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 6, 42

Conread position: 109-288
Cow position: chr12:21211561-21211750 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:21664949-21665137 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:22202855-22202666 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:22518099-22517910 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 56

Conread position: 109-288
Cow position: chr12:22748027-22748216 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:23138513-23138327 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 53

Conread position: 109-288
Cow position: chr12:24029915-24029729 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 6, 55

Conread position: 109-288
Cow position: chr12:24696359-24696547 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:24993010-24992821 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:25097450-25097262 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 145, 55

Conread position: 109-288
Cow position: chr12:25148805-25148616 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 56

Conread position: 109-288
Cow position: chr12:27929979-27929790 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:27958713-27958524 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:27993913-27994102 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:31028004-31027819 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 53

Conread position: 109-288
Cow position: chr12:35548314-35548125 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:36405855-36405666 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:39929981-39930170 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:42232122-42232311 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr12:42605363-42605174 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr12:45144869-45145054 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 57

Conread position: 109-288
Cow position: chr12:46163552-46163741 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 113-288
Cow position: chr12:551996-551813 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 34

Conread position: 113-288
Cow position: chr12:8773487-8773667 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 138, 48

Conread position: 113-288
Cow position: chr12:10358516-10358697 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 143, 49

Conread position: 113-288
Cow position: chr12:25266515-25266331 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 51

Conread position: 123-288
Cow position: chr12:1490995-1491168 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 133, 15

Conread position: 125-288
Cow position: chr12:1006844-1007017 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 129-288
Cow position: chr12:31329783-31329617 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 35

Conread position: 136-288
Cow position: chr12:32757536-32757698 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 29

Conread position: 165-288
Cow position: chr12:42194503-42194636 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 169-288
Cow position: chr12:1056635-1056506 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 178-288
Cow position: chr12:1405332-1405450 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 178-288
Cow position: chr12:35161489-35161609 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 178-288
Cow position: chr12:35162645-35162765 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Show alignments to all cow chromosomes.