Cow genome map
Conread name: | rtra13_j5r1.y1 |
Conread position: | 72-288 |
Cow position: | chr12:34176142-34176366 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 179 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 43, 21 |
Conread position: | 108-288 |
Cow position: | chr12:21201622-21201816 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 146 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 8, 57 |
Conread position: | 109-286 |
Cow position: | chr12:22480183-22479996 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 155 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:62395-62206 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:536756-536567 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:1437741-1437930 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 154 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:1469312-1469123 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:1511951-1511762 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:3717457-3717272 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 154 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 109-288 |
Cow position: | chr12:5328096-5327908 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 156 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 46 |
Conread position: | 109-288 |
Cow position: | chr12:8675251-8675063 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 151 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:11101061-11101250 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 154 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 11, 56 |
Conread position: | 109-288 |
Cow position: | chr12:12755342-12755153 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 153 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:14569002-14568813 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:15539611-15539800 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:17718114-17718302 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 156 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 6, 42 |
Conread position: | 109-288 |
Cow position: | chr12:21211561-21211750 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:21664949-21665137 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 150 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:22202855-22202666 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 150 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:22518099-22517910 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 8, 56 |
Conread position: | 109-288 |
Cow position: | chr12:22748027-22748216 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:23138513-23138327 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 149 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 6, 53 |
Conread position: | 109-288 |
Cow position: | chr12:24029915-24029729 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 143 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 6, 55 |
Conread position: | 109-288 |
Cow position: | chr12:24696359-24696547 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 158 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:24993010-24992821 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:25097450-25097262 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 154 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 145, 55 |
Conread position: | 109-288 |
Cow position: | chr12:25148805-25148616 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 152 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 9, 56 |
Conread position: | 109-288 |
Cow position: | chr12:27929979-27929790 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:27958713-27958524 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:27993913-27994102 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 154 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:31028004-31027819 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 158 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 53 |
Conread position: | 109-288 |
Cow position: | chr12:35548314-35548125 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:36405855-36405666 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:39929981-39930170 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 156 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:42232122-42232311 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 152 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 10, 56 |
Conread position: | 109-288 |
Cow position: | chr12:42605363-42605174 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 153 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 109-288 |
Cow position: | chr12:45144869-45145054 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 144 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 9, 57 |
Conread position: | 109-288 |
Cow position: | chr12:46163552-46163741 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 6, 56 |
Conread position: | 113-288 |
Cow position: | chr12:551996-551813 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 145 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 139, 34 |
Conread position: | 113-288 |
Cow position: | chr12:8773487-8773667 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 138, 48 |
Conread position: | 113-288 |
Cow position: | chr12:10358516-10358697 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 153 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 143, 49 |
Conread position: | 113-288 |
Cow position: | chr12:25266515-25266331 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 158 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 51 |
Conread position: | 123-288 |
Cow position: | chr12:1490995-1491168 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 142 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 133, 15 |
Conread position: | 125-288 |
Cow position: | chr12:1006844-1007017 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 129-288 |
Cow position: | chr12:31329783-31329617 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 135 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 125, 35 |
Conread position: | 136-288 |
Cow position: | chr12:32757536-32757698 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 11, 29 |
Conread position: | 165-288 |
Cow position: | chr12:42194503-42194636 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 169-288 |
Cow position: | chr12:1056635-1056506 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 178-288 |
Cow position: | chr12:1405332-1405450 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 101 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 178-288 |
Cow position: | chr12:35161489-35161609 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 102 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 178-288 |
Cow position: | chr12:35162645-35162765 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 102 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.